Detailed information NTG1017017

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: AB0R62_RS07980
• Genome accession: NZ_CP160002
• Coordinates: 1613584..1614081 (-)
• Length: 165 a.a.
• NCBI ID: WP_001789864.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain Newman D2C HOM
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1608584..1619081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R62_RS07955 (AB0R62_07955)	gcvPB	1608746..1610218 (-)	1473	WP_000202192.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
AB0R62_RS07960 (AB0R62_07960)	gcvPA	1610211..1611557 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
AB0R62_RS07965 (AB0R62_07965)	gcvT	1611577..1612668 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
AB0R62_RS07970 (AB0R62_07970)	-	1612827..1613351 (-)	525	WP_001015117.1	shikimate kinase	-
AB0R62_RS07975 (AB0R62_07975)	-	1613341..1613487 (-)	147	WP_001789879.1	hypothetical protein	-
AB0R62_RS07980 (AB0R62_07980)	comGF	1613584..1614081 (-)	498	WP_001789864.1	competence type IV pilus minor pilin ComGF	Machinery gene
AB0R62_RS07985 (AB0R62_07985)	comGE	1613999..1614298 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
AB0R62_RS07990 (AB0R62_07990)	comGD	1614285..1614731 (-)	447	WP_001790850.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB0R62_RS07995 (AB0R62_07995)	comGC	1614709..1615020 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
AB0R62_RS08000 (AB0R62_08000)	comGB	1615034..1616104 (-)	1071	WP_000775708.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB0R62_RS08005 (AB0R62_08005)	comGA	1616076..1617050 (-)	975	WP_000697228.1	competence type IV pilus ATPase ComGA	Machinery gene
AB0R62_RS08010 (AB0R62_08010)	-	1617102..1617725 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
AB0R62_RS08015 (AB0R62_08015)	-	1617722..1618051 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
AB0R62_RS08020 (AB0R62_08020)	-	1618051..1619037 (-)	987	WP_000161314.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19164.88 Da
• Isoelectric Point: 10.2192

>NTDB_id=1017017 AB0R62_RS07980 WP_001789864.1 1613584..1614081(-) (comGF) [Staphylococcus aureus strain Newman D2C HOM]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRDLTTVDFEFFSRDI
LDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1017017 AB0R62_RS07980 WP_001789864.1 1613584..1614081(-) (comGF) [Staphylococcus aureus strain Newman D2C HOM]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGTAAAACTTTTCTAATTGAAAGTAGGGATTTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGATGATTTTAAAGGAGTAGATAGAAACGATATTGAAATTAGGCAACACCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATTAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (67-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	100	100	1
comGF	Staphylococcus aureus N315	96.364	100	0.964