Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DQL06_RS03785 Genome accession   NZ_LS483321
Coordinates   704380..704562 (+) Length   60 a.a.
NCBI ID   WP_111677352.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8314     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 699380..709562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL06_RS03755 (NCTC8314_00749) - 700096..700524 (+) 429 WP_076634202.1 DUF1617 family protein -
  DQL06_RS03760 (NCTC8314_00750) - 700527..701159 (+) 633 WP_111689530.1 hypothetical protein -
  DQL06_RS03765 (NCTC8314_00751) - 701170..701625 (+) 456 WP_011184730.1 phage holin family protein -
  DQL06_RS03770 (NCTC8314_00753) - 701743..702495 (+) 753 WP_002993615.1 CHAP domain-containing protein -
  DQL06_RS03775 (NCTC8314_00754) speC 702564..703271 (-) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  DQL06_RS03780 (NCTC8314_00755) mf2 703382..704140 (-) 759 WP_011184727.1 DNase Mf2 -
  DQL06_RS03785 (NCTC8314_00756) prx 704380..704562 (+) 183 WP_111677352.1 Paratox Regulator
  DQL06_RS03790 (NCTC8314_00757) - 705094..706956 (+) 1863 WP_010922444.1 heavy metal translocating P-type ATPase -
  DQL06_RS09615 - 707028..707201 (+) 174 WP_168388906.1 hypothetical protein -
  DQL06_RS03795 (NCTC8314_00758) - 707256..708191 (-) 936 WP_010922443.1 dihydroorotate oxidase -
  DQL06_RS03800 (NCTC8314_00759) - 708430..709125 (+) 696 WP_030126406.1 phosphoglycerate mutase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7051.01 Da        Isoelectric Point: 4.1079

>NTDB_id=1017018 DQL06_RS03785 WP_111677352.1 704380..704562(+) (prx) [Streptococcus pyogenes strain NCTC8314]
MLTYDEFKQAIDNGYITADAVMIVRKNGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1017018 DQL06_RS03785 WP_111677352.1 704380..704562(+) (prx) [Streptococcus pyogenes strain NCTC8314]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACGCAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

90

100

0.9

  prx Streptococcus pyogenes MGAS8232

81.667

100

0.817

  prx Streptococcus pyogenes MGAS315

76.667

100

0.767

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583

  prx Streptococcus pyogenes MGAS315

80.952

70

0.567

  prx Streptococcus pyogenes MGAS315

73.81

70

0.517


Multiple sequence alignment