Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB0R62_RS07985 | Genome accession | NZ_CP160002 |
| Coordinates | 1613999..1614298 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain Newman D2C HOM | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1608999..1619298
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R62_RS07960 (AB0R62_07960) | gcvPA | 1610211..1611557 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AB0R62_RS07965 (AB0R62_07965) | gcvT | 1611577..1612668 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB0R62_RS07970 (AB0R62_07970) | - | 1612827..1613351 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| AB0R62_RS07975 (AB0R62_07975) | - | 1613341..1613487 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB0R62_RS07980 (AB0R62_07980) | comGF | 1613584..1614081 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB0R62_RS07985 (AB0R62_07985) | comGE | 1613999..1614298 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB0R62_RS07990 (AB0R62_07990) | comGD | 1614285..1614731 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB0R62_RS07995 (AB0R62_07995) | comGC | 1614709..1615020 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB0R62_RS08000 (AB0R62_08000) | comGB | 1615034..1616104 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB0R62_RS08005 (AB0R62_08005) | comGA | 1616076..1617050 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB0R62_RS08010 (AB0R62_08010) | - | 1617102..1617725 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AB0R62_RS08015 (AB0R62_08015) | - | 1617722..1618051 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB0R62_RS08020 (AB0R62_08020) | - | 1618051..1619037 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB0R62_RS08025 (AB0R62_08025) | - | 1619034..1619237 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1017018 AB0R62_RS07985 WP_000844413.1 1613999..1614298(-) (comGE) [Staphylococcus aureus strain Newman D2C HOM]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1017018 AB0R62_RS07985 WP_000844413.1 1613999..1614298(-) (comGE) [Staphylococcus aureus strain Newman D2C HOM]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |