Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ABWI26_RS09830 Genome accession   NZ_CP159983
Coordinates   1973445..1974713 (-) Length   422 a.a.
NCBI ID   WP_119326092.1    Uniprot ID   -
Organism   Companilactobacillus musae strain zy 130     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1968445..1979713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABWI26_RS09825 - 1971724..1973430 (-) 1707 WP_119326093.1 proline--tRNA ligase -
  ABWI26_RS09830 eeP 1973445..1974713 (-) 1269 WP_119326092.1 RIP metalloprotease RseP Regulator
  ABWI26_RS09835 - 1974733..1975527 (-) 795 WP_119326091.1 phosphatidate cytidylyltransferase -
  ABWI26_RS09840 - 1975546..1976289 (-) 744 WP_119326090.1 isoprenyl transferase -
  ABWI26_RS09845 frr 1976294..1976851 (-) 558 WP_119326089.1 ribosome recycling factor -
  ABWI26_RS09850 pyrH 1976841..1977575 (-) 735 WP_119326088.1 UMP kinase -
  ABWI26_RS09855 tsf 1978193..1979071 (-) 879 WP_119326087.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45581.14 Da        Isoelectric Point: 9.8484

>NTDB_id=1016992 ABWI26_RS09830 WP_119326092.1 1973445..1974713(-) (eeP) [Companilactobacillus musae strain zy 130]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNHTTYTLRLLPLGGYVRMAGAQEDDSEIQPG
TMASLVLNDDDKVTKIITSSKVYDANAVPVQISKADLVDDLVIEGYENGDETVTKKYSVDHDATIVEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFILAIVAAILAAFMMGSVGTGTNQLGGIEKGSVAQKAGLKSNDKILSVNGKKTGSWASL
TESIQNNPGKKLTLNVQSGNKIKQVKLTPKTVKSSGQSYGLIGIKAKLDSSVLGKIKYGFTYSWSTSLTIFHALGKMVSG
GFSINQLSGPVGIYSMTSKVASTGLINIILFTSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPIPEQYENVITLIG
VGILVLLMIAVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1016992 ABWI26_RS09830 WP_119326092.1 1973445..1974713(-) (eeP) [Companilactobacillus musae strain zy 130]
ATGACCGCGATAATTACATTTATAATCGTTTTTGGAATTTTAGTAATCGTTCATGAATTTGGACACTATTATGCTGCAAA
GAAGTCAGGAATTTTAGTTCGTGAATTTTCTGTAGGTATGGGTCCTAAAATCGTCGCTTATCGAAAAAATCATACGACAT
ATACCTTGAGACTTTTGCCTTTGGGTGGCTATGTTCGAATGGCTGGAGCACAAGAAGATGATTCAGAAATTCAACCAGGA
ACGATGGCATCTTTAGTTTTAAATGATGACGACAAAGTAACAAAAATAATAACTTCAAGTAAAGTTTACGATGCAAACGC
GGTTCCCGTTCAAATCTCTAAGGCCGATCTTGTAGATGATTTAGTAATTGAAGGATATGAAAATGGTGATGAAACTGTCA
CTAAGAAATATTCGGTTGATCATGATGCAACCATTGTTGAAGAAGATGGAACTGAAGTTCAAATTGCACCGCGTGACGTT
CAGTTACAGTCAGTTTCGGTTTGGAAACGAATGATCACTAATTTTGCTGGACCATTTAATAACTTTATTCTAGCTATCGT
AGCAGCTATTTTAGCTGCCTTTATGATGGGTTCAGTTGGTACTGGAACAAATCAACTTGGTGGCATTGAAAAAGGCTCTG
TGGCCCAAAAAGCTGGTTTAAAGAGCAATGATAAAATTTTAAGCGTTAATGGTAAAAAAACTGGTTCATGGGCTAGTTTA
ACCGAGAGTATTCAGAATAATCCTGGTAAGAAATTAACGTTGAATGTACAATCCGGTAATAAGATTAAACAAGTTAAATT
GACTCCTAAAACAGTCAAATCGTCAGGTCAAAGTTATGGCTTGATTGGAATAAAGGCTAAGTTGGATTCAAGTGTCCTTG
GGAAGATCAAGTATGGATTTACATATAGCTGGAGTACATCATTAACCATTTTCCATGCTTTGGGTAAGATGGTATCAGGC
GGATTCAGTATTAATCAGTTGTCAGGTCCAGTTGGAATTTATTCAATGACTTCTAAAGTTGCCTCAACTGGTTTGATCAA
TATCATTCTCTTTACGTCAATGTTATCGATGAATTTAGGAATCGTTAATTTGATACCAATTCCTGCTTTAGATGGTGGCA
AGATTTTACTTAATATTGTTGAAGCAATTAGAAGAAAACCAATTCCAGAACAATATGAAAATGTTATTACCTTGATAGGG
GTCGGGATTTTAGTACTTTTGATGATTGCCGTTACATGGAATGATATCCAGCGTTTCTTTATAAAATAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(209-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.592

100

0.491
  eeP Streptococcus thermophilus LMD-9

48.357

100

0.488

Multiple sequence alignment