Detailed information NTG1016784

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ABXV02_RS19755
• Genome accession: NZ_CP159912
• Coordinates: 3768040..3769188 (-)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain PY79
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3763040..3774188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXV02_RS19725	yclO	3763757..3764704 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
ABXV02_RS19730	ceuB	3764697..3765647 (-)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
ABXV02_RS19735	thrD	3766032..3767396 (+)	1365	WP_009966541.1	aspartate kinase	-
ABXV02_RS19740	yczN	3767550..3767663 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
ABXV02_RS19745	yczM	3767745..3767834 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
ABXV02_RS19750	phrC	3767934..3768056 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
ABXV02_RS19755	rapC	3768040..3769188 (-)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
ABXV02_RS19760	yclK	3769351..3770772 (-)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
ABXV02_RS19765	yclJ	3770759..3771442 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
ABXV02_RS19770	yclI	3771655..3773115 (+)	1461	WP_003234506.1	ABC transporter permease	-
ABXV02_RS19775	yclH	3773131..3773811 (+)	681	WP_003234507.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=1016784 ABXV02_RS19755 WP_003246686.1 3768040..3769188(-) (rapC) [Bacillus subtilis strain PY79]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1016784 ABXV02_RS19755 WP_003246686.1 3768040..3769188(-) (rapC) [Bacillus subtilis strain PY79]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571