Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABXV02_RS19730 Genome accession   NZ_CP159912
Coordinates   3764697..3765647 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis strain PY79     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3759697..3770647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS19710 cdaE 3760565..3761983 (+) 1419 WP_003246604.1 MDR family MFS transporter -
  ABXV02_RS19715 yclQ 3762030..3762983 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ABXV02_RS19720 yclP 3763005..3763763 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  ABXV02_RS19725 yclO 3763757..3764704 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  ABXV02_RS19730 ceuB 3764697..3765647 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  ABXV02_RS19735 thrD 3766032..3767396 (+) 1365 WP_009966541.1 aspartate kinase -
  ABXV02_RS19740 yczN 3767550..3767663 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  ABXV02_RS19745 yczM 3767745..3767834 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  ABXV02_RS19750 phrC 3767934..3768056 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ABXV02_RS19755 rapC 3768040..3769188 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=1016782 ABXV02_RS19730 WP_003234491.1 3764697..3765647(-) (ceuB) [Bacillus subtilis strain PY79]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1016782 ABXV02_RS19730 WP_003234491.1 3764697..3765647(-) (ceuB) [Bacillus subtilis strain PY79]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment