Detailed information NTG1016396

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABYM97_RS16495
• Genome accession: NZ_CP159874
• Coordinates: 3195890..3196507 (-)
• Length: 205 a.a.
• NCBI ID: WP_004398514.1
• Uniprot ID: A0AAE2SLR2
• Organism: Bacillus subtilis strain PY79
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3190890..3201507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABYM97_RS16465 (ABYM97_16465)	rpsT	3191192..3191458 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
ABYM97_RS16470 (ABYM97_16470)	holA	3191473..3192516 (-)	1044	WP_003229987.1	DNA polymerase III subunit delta	-
ABYM97_RS16475 (ABYM97_16475)	-	3192556..3192705 (-)	150	WP_003229985.1	hypothetical protein	-
ABYM97_RS16480 (ABYM97_16480)	yqzM	3192746..3192880 (+)	135	WP_003229983.1	YqzM family protein	-
ABYM97_RS16485 (ABYM97_16485)	comEC	3192920..3195250 (-)	2331	WP_009967776.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABYM97_RS16490 (ABYM97_16490)	comEB	3195254..3195823 (-)	570	WP_003229978.1	ComE operon protein 2	-
ABYM97_RS16495 (ABYM97_16495)	comEA	3195890..3196507 (-)	618	WP_004398514.1	competence protein ComEA	Machinery gene
ABYM97_RS16500 (ABYM97_16500)	comER	3196591..3197412 (+)	822	WP_004398597.1	late competence protein ComER	-
ABYM97_RS16505 (ABYM97_16505)	yqeM	3197478..3198221 (-)	744	WP_003229973.1	class I SAM-dependent methyltransferase	-
ABYM97_RS16510 (ABYM97_16510)	rsfS	3198218..3198574 (-)	357	WP_003229971.1	ribosome silencing factor	-
ABYM97_RS16515 (ABYM97_16515)	yqeK	3198592..3199152 (-)	561	WP_004399059.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ABYM97_RS16520 (ABYM97_16520)	nadD	3199142..3199711 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
ABYM97_RS16525 (ABYM97_16525)	yhbY	3199723..3200013 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
ABYM97_RS16530 (ABYM97_16530)	aroE	3200007..3200849 (-)	843	WP_003229967.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21769.45 Da
• Isoelectric Point: 4.7220

>NTDB_id=1016396 ABYM97_RS16495 WP_004398514.1 3195890..3196507(-) (comEA) [Bacillus subtilis strain PY79]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1016396 ABYM97_RS16495 WP_004398514.1 3195890..3196507(-) (comEA) [Bacillus subtilis strain PY79]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAACGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTGGCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAGGAAAACGGTCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (142-203)

• SLBB domain (SLBB) (63-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
comEA	Staphylococcus aureus MW2	37.273	100	0.4
comEA	Staphylococcus aureus N315	36.364	100	0.39