Detailed information NTG1014137

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABWX03_RS10125
• Genome accession: NZ_CP159519
• Coordinates: 2147871..2148572 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain NAB01B-R1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2142871..2153572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABWX03_RS10095 (ABWX03_10095)	-	2143177..2143620 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABWX03_RS10100 (ABWX03_10100)	tadA	2143690..2144193 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABWX03_RS10105 (ABWX03_10105)	-	2144200..2145324 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABWX03_RS10110 (ABWX03_10110)	ung	2145321..2146034 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABWX03_RS10115 (ABWX03_10115)	-	2146085..2146681 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABWX03_RS10120 (ABWX03_10120)	gspK	2146912..2147871 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABWX03_RS10125 (ABWX03_10125)	xcpW	2147871..2148572 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABWX03_RS10130 (ABWX03_10130)	xcpV	2148572..2148952 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABWX03_RS10135 (ABWX03_10135)	-	2148942..2149496 (-)	555	WP_000841373.1	type II secretion system protein	-
ABWX03_RS10140 (ABWX03_10140)	-	2149506..2150114 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABWX03_RS10145 (ABWX03_10145)	-	2150152..2150925 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABWX03_RS10150 (ABWX03_10150)	-	2150943..2151284 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABWX03_RS10155 (ABWX03_10155)	-	2151296..2152276 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABWX03_RS10160 (ABWX03_10160)	kdsB	2152288..2153049 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1014137 ABWX03_RS10125 WP_000594589.1 2147871..2148572(-) (xcpW) [Acinetobacter baumannii strain NAB01B-R1]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1014137 ABWX03_RS10125 WP_000594589.1 2147871..2148572(-) (xcpW) [Acinetobacter baumannii strain NAB01B-R1]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996