Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABNG17_RS15060 Genome accession   NZ_CP158181
Coordinates   2802181..2804493 (-) Length   770 a.a.
NCBI ID   WP_350303504.1    Uniprot ID   -
Organism   Bacillus pumilus strain RI06-95     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2797181..2809493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNG17_RS15020 (ABNG17_15005) - 2797591..2798022 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  ABNG17_RS15025 (ABNG17_15010) - 2798022..2798363 (+) 342 WP_350303502.1 Na(+)/H(+) antiporter subunit C -
  ABNG17_RS15030 (ABNG17_15015) - 2798356..2799834 (+) 1479 WP_350303503.1 Na+/H+ antiporter subunit D -
  ABNG17_RS15035 (ABNG17_15020) - 2799841..2800320 (+) 480 WP_310425839.1 Na+/H+ antiporter subunit E -
  ABNG17_RS15040 (ABNG17_15025) - 2800320..2800601 (+) 282 WP_012011105.1 Na(+)/H(+) antiporter subunit F1 -
  ABNG17_RS15045 (ABNG17_15030) mnhG 2800585..2800959 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  ABNG17_RS15050 (ABNG17_15035) - 2801046..2801435 (-) 390 WP_106066313.1 hotdog fold thioesterase -
  ABNG17_RS15055 (ABNG17_15040) comA 2801459..2802100 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  ABNG17_RS15060 (ABNG17_15045) comP 2802181..2804493 (-) 2313 WP_350303504.1 ATP-binding protein Regulator
  ABNG17_RS15065 (ABNG17_15050) comX 2804548..2804718 (-) 171 WP_212045489.1 competence pheromone ComX -
  ABNG17_RS15070 (ABNG17_15055) - 2804715..2805629 (-) 915 WP_212045490.1 polyprenyl synthetase family protein -
  ABNG17_RS15075 (ABNG17_15060) degQ 2805781..2805921 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  ABNG17_RS15080 (ABNG17_15065) - 2806427..2806780 (+) 354 WP_050944043.1 hypothetical protein -
  ABNG17_RS15085 (ABNG17_15070) - 2806811..2808037 (-) 1227 WP_050944044.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89388.90 Da        Isoelectric Point: 7.2023

>NTDB_id=1010146 ABNG17_RS15060 WP_350303504.1 2802181..2804493(-) (comP) [Bacillus pumilus strain RI06-95]
MKITYTKLSAFFVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
MINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYLIPLILYSICLFCIFFIIRINKEAQRKSAFLLVLFLLTICIGY
LSAGTSGIGERFSHYVIVFCLSSVFIFYIHFIYQYFKEFNLHITNQKTIRLLYSLPVINLLIELAVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTIFVIVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSNLWKEYVDQFQDILGEVGKI
IGLDKGFMMKIGERGGHSFVICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKEMDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQPTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=1010146 ABNG17_RS15060 WP_350303504.1 2802181..2804493(-) (comP) [Bacillus pumilus strain RI06-95]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTCGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
ATGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTTAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATTTAATTCCTCTAATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTAGAATTAACAAAGAGGCCCAACGGAAATCAGCATTTCTATTAGTTTTATTTTTATTAACGATTTGTATCGGGTAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAAAGATTTAGCCATTATGTGATCGTATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAGTATTTTAAAGAGTTTAACTTGCATATAACAAATCAAAAAACAATTCGCCTTTTATATA
GTCTTCCAGTAATTAATCTATTGATAGAGCTAGCAGTTCCAATAGATTCAGCGATAGCAAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTCTGTCCATTTATATTTTTATTTGCAATACCATATG
TTTTGTTTCGTATTTATGTAGTAGATCCCTTTTTCTTGACTTCTTTTGTCTTGCTTATTCCTTTTTCTCTAGTGTACCAA
TTCATGACGAACAAACTATACAATATGGACTTTTTGATTAGTAGACTGAAATACTATGGCTTTTTAGCCATTACACCGAC
CATTTTTGTTATTGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTGAAGTATACATTGAAACTCGCATTAATCACCT
ATACACTCATGCTTGCTGTCTTTTATTTTAAAGAAATTCTAGATTTCCGCTTCCGGCTGAAACGTTTTTCAGAGAAGCAT
AATTACCAGGACAGTGTGTTTAAATTTACGCAGCTCATCCGTGAGGCGTCATCACTTCACCAAGTGCTTTATCATTTGAA
ATACACCATTTTAGAAGTGCTGGTTGTTAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGGCAGATTGAAGAGATTG
ATGAATCTTCAGGTGATAGCAATCTATGGAAAGAGTATGTGGATCAATTTCAGGATATTTTAGGGGAAGTCGGGAAAATC
ATTGGGCTTGATAAAGGGTTCATGATGAAAATTGGCGAGCGGGGTGGTCACTCGTTTGTGATTTGCTGCTTATCCAATTT
ACAGACACCTAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCATTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATTGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAAGTC
ATGTTTGCGATGGAAGAAAAACAGCGCTCCGATTTAGCAAGGGATCTCCATGATTCCGTGCTACAGGATTTGATATCGCT
GAAAAGACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACGACAAGAGAAACGTGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTA
GGTTTAGTGAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCGTTTCATATTCGGCTGAATACGACACG
CTTTGATAAGGAGATGGACATTGATATTGACTCCCAGCTTAATATTTACCGGATTGTTCAGGAATTGTTATCCAATGCCT
TGAAACATTCTCAAGCCAGCCAAGTGCTCGTAATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGAT
GGAGTTGGTTTTGACGCAAGCCATCTTGATCAGCCCACCATGAGCATGGGCCTCTCTGGAATCAGAGAACGAGTCAAGGC
GTTAAATGGGAAGCTTCACATTCATACCGCACCTGAAAAAGGGTTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.077

100

0.487


Multiple sequence alignment