Detailed information NTG1009474

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABJ384_RS07325
• Genome accession: NZ_CP157981
• Coordinates: 1466781..1467977 (+)
• Length: 398 a.a.
• NCBI ID: WP_349929653.1
• Uniprot ID: A0AAU7T1F4
• Organism: Acinetobacter sp. A1-4-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1461781..1472977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABJ384_RS07310 (ABJ384_07300)	-	1462288..1463403 (+)	1116	WP_349929650.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABJ384_RS07315 (ABJ384_07305)	-	1463485..1464690 (-)	1206	WP_349929651.1	amino acid aminotransferase	-
ABJ384_RS07320 (ABJ384_07310)	-	1465386..1466447 (+)	1062	WP_349929652.1	3-deoxy-7-phosphoheptulonate synthase	-
ABJ384_RS07325 (ABJ384_07315)	pilU	1466781..1467977 (+)	1197	WP_349929653.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABJ384_RS07330 (ABJ384_07320)	gcvH	1468132..1468506 (-)	375	WP_349929654.1	glycine cleavage system protein GcvH	-
ABJ384_RS07335 (ABJ384_07325)	-	1468578..1469606 (-)	1029	WP_349929655.1	AraC family transcriptional regulator ligand-binding domain-containing protein	-
ABJ384_RS07340 (ABJ384_07330)	-	1469714..1470163 (-)	450	WP_349929656.1	MaoC family dehydratase	-
ABJ384_RS07345 (ABJ384_07335)	-	1470163..1472016 (-)	1854	WP_349929657.1	ABC transporter ATP-binding protein	-
ABJ384_RS07350 (ABJ384_07340)	-	1472217..1472402 (-)	186	Protein_1410	IS5/IS1182 family transposase	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 44992.50 Da
• Isoelectric Point: 6.7140

>NTDB_id=1009474 ABJ384_RS07325 WP_349929653.1 1466781..1467977(+) (pilU) [Acinetobacter sp. A1-4-2]
MYSTELLEEARKMMFHMLTKVVEYGGSDLFISADFPPSIKHQGLMKPLGQQALTADKTKLFAYSLMNEKQRHEFETELEC
NFAISVPNVSRFRVNVFQQQLHVGMVIRTITAEIPNFDQLKLPESLKHVMMAKRGLILVVGATGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGRGRRAAIEILLNTPLIGDNILKGQFHELKEIMKKS
RELGMQTFDQALYDLYNEGAISYEEALRNADSMNELRLQIKLKSNRQDQMVPGSAASFSMLQDKDPEENQAKTGPETP

Nucleotide

• Length: 1197 bp

>NTDB_id=1009474 ABJ384_RS07325 WP_349929653.1 1466781..1467977(+) (pilU) [Acinetobacter sp. A1-4-2]
ATGTATAGTACGGAATTACTGGAAGAAGCACGTAAAATGATGTTCCATATGCTGACTAAGGTGGTGGAATATGGAGGATC
TGATTTATTTATTTCAGCAGATTTTCCACCGAGTATTAAACATCAGGGCTTAATGAAACCGCTTGGCCAGCAGGCATTGA
CTGCCGACAAGACCAAGTTGTTCGCCTATAGTTTAATGAATGAAAAACAGAGGCATGAGTTTGAAACCGAGCTGGAATGT
AATTTTGCCATTAGTGTTCCCAATGTTTCGCGCTTTCGTGTCAATGTATTCCAGCAGCAATTACATGTAGGGATGGTAAT
ACGGACCATTACCGCAGAAATTCCAAATTTTGACCAGTTAAAGCTTCCCGAGTCCTTAAAGCATGTGATGATGGCAAAAC
GCGGTCTGATACTTGTGGTCGGTGCTACCGGTTCGGGGAAATCGACTTCTTTAGCTGCCATGATTGATCATCGTAATGAA
AATTCTGCCGGGCACATTATTACCGTGGAAGATCCGGTAGAATATGTGCATAAGCATAAGAAATCGATGATTACCCACCG
CGAAGTCGGCGTGGATAGTCATTCATGGCACAATGCCTTGAAGAATACCTTGCGTCAGGCACCGGATGTCATTTTAATTG
GTGAAATCCGTGACACGGAAACTATGGAACATGCCATTGCCTTTGCCGAAACCGGACATTTATGTTTAGGTACTTTACAT
GCCAATAATGCCAATCAGGCGCTGGATCGAATTATCAACTTTTTCCCGGAAGAACGTCGCAATCAATTGTTGATGGATTT
ATCTTCCAATATGAAGGCGATTATTTCACAGCGTTTGGTGCGTACTGAAGATGGACGTGGACGTCGTGCAGCCATTGAAA
TTTTGCTGAATACACCTTTAATTGGAGATAATATCCTGAAAGGCCAGTTTCATGAACTCAAAGAAATCATGAAGAAATCT
CGTGAATTGGGCATGCAAACTTTCGATCAGGCTTTATATGATTTATATAATGAGGGTGCGATCAGTTATGAAGAAGCATT
GCGTAATGCCGACTCCATGAATGAATTGCGCTTGCAGATTAAATTGAAAAGTAACAGACAGGATCAAATGGTTCCAGGTT
CAGCTGCATCATTCAGTATGCTGCAAGATAAAGATCCGGAAGAGAATCAAGCTAAGACAGGCCCGGAAACACCTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (105-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	58.221	93.216	0.543
pilU	Acinetobacter baylyi ADP1	56.484	87.186	0.492
pilU	Vibrio cholerae strain A1552	52.101	89.698	0.467