Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ABKA15_RS07815 Genome accession   NZ_CP157941
Coordinates   1596030..1597076 (-) Length   348 a.a.
NCBI ID   WP_049514339.1    Uniprot ID   A0A7L8W6I4
Organism   Streptococcus sp. KHUD_010     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1591030..1602076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS07785 (ABKA15_07775) nusA 1591214..1592407 (-) 1194 WP_049514334.1 transcription termination factor NusA -
  ABKA15_RS07790 (ABKA15_07780) rimP 1592458..1592946 (-) 489 WP_049514335.1 ribosome maturation factor RimP -
  ABKA15_RS07795 (ABKA15_07785) - 1593194..1593883 (-) 690 WP_026248194.1 VIT family protein -
  ABKA15_RS07800 (ABKA15_07790) - 1594025..1594206 (-) 182 Protein_1528 dihydroxyacetone kinase transcriptional activator DhaS -
  ABKA15_RS07805 (ABKA15_07795) trmB 1594550..1595185 (-) 636 WP_049514336.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ABKA15_RS07810 (ABKA15_07800) - 1595182..1595979 (-) 798 WP_049514337.1 phosphotransferase family protein -
  ABKA15_RS07815 (ABKA15_07805) pptB 1596030..1597076 (-) 1047 WP_049514339.1 ABC transporter permease Regulator
  ABKA15_RS07820 (ABKA15_07810) pptA 1597073..1597804 (-) 732 WP_003025975.1 ABC transporter ATP-binding protein Regulator
  ABKA15_RS07825 (ABKA15_07815) - 1597873..1598283 (+) 411 WP_003025977.1 HIT family protein -
  ABKA15_RS07830 (ABKA15_07820) - 1598293..1598580 (+) 288 WP_049514340.1 hypothetical protein -
  ABKA15_RS07835 (ABKA15_07825) - 1598627..1599742 (-) 1116 WP_049514342.1 LCP family protein -
  ABKA15_RS07840 (ABKA15_07830) - 1599749..1600270 (-) 522 WP_186832779.1 GNAT family N-acetyltransferase -
  ABKA15_RS07845 (ABKA15_07835) tsaE 1600263..1600703 (-) 441 WP_049514344.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 40935.29 Da        Isoelectric Point: 10.3649

>NTDB_id=1009137 ABKA15_RS07815 WP_049514339.1 1596030..1597076(-) (pptB) [Streptococcus sp. KHUD_010]
MRELFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFTGFLAVQYSQLLRNLPSNHLPIILALAVLLILLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWVLLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYHAFDYQYLTFLFPLEINSKLKGVKQVIALIGYSVLFVEIMMALLFFQD
RVALLFMIGITLLLYVIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=1009137 ABKA15_RS07815 WP_049514339.1 1596030..1597076(-) (pptB) [Streptococcus sp. KHUD_010]
ATGAGAGAACTGTTTCAAAAGCGCAAACAAGTATTTCGCAATCAATGTTTGAAGTATTCGCGCTATGTTTTTAACGACCA
TTTTGTCCTCTTTTTATTAGTTTTTACTGGCTTTTTAGCTGTTCAATACAGTCAGTTGTTGCGAAATTTACCTTCAAATC
ACCTGCCAATCATTCTTGCTTTAGCAGTTCTTTTGATTTTATTGTTGCCTCTGGGACGAATCGCAACATATATGGAAAAA
CCAGATAGTCTATTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGGTT
ATGGGTCTTGCTTCAAACTGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTACGAAGAAAGACGCAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAACGT
TAAGGGAATTTCCAATAGCGTAAAACGCCGAGCATATCTTGATGGTTTGACGAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATGTATTTGCGTTCTTATTTGCGCAATGGTGATTTTCTTGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCGTGGATTGCTGCCATATTTGTGGCATTGTTAAATTATCTCCTGCTATTTCA
GTTGACAGCCTTGTACCATGCCTTTGATTACCAATATTTGACGTTCTTATTCCCTTTAGAAATCAATTCAAAGTTAAAAG
GAGTGAAACAAGTGATTGCTCTTATTGGCTACAGCGTGCTTTTTGTGGAAATAATGATGGCTTTGCTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATAGGAATCACATTGCTACTCTATGTCATTTATTTACCATTCAAATTAAGAAGTTTGGT
TGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-158)

Bacterial ABC transporter protein EcsB (EcsB)

(160-329)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L8W6I4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483
  pptB Streptococcus salivarius strain HSISS4

47.126

100

0.471

Multiple sequence alignment