Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H0507_RS05385 Genome accession   NZ_LR822010
Coordinates   1007789..1008271 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus isolate STH_CIRM_29     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1002789..1013271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0507_RS05365 (STHERMO_1167) pepT 1003269..1004492 (-) 1224 WP_011226068.1 peptidase T -
  H0507_RS05370 (STHERMO_1169) lepB 1004701..1005258 (-) 558 WP_011226069.1 signal peptidase I -
  H0507_RS05375 (STHERMO_1170) - 1005381..1006610 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  H0507_RS05380 (STHERMO_1171) - 1006600..1007778 (-) 1179 WP_011227264.1 AI-2E family transporter -
  H0507_RS05385 (STHERMO_1172) mutX 1007789..1008271 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  H0507_RS05390 (STHERMO_1173) ftsX 1008427..1009356 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  H0507_RS05395 (STHERMO_1174) ftsE 1009349..1010041 (-) 693 WP_041827149.1 cell division ATP-binding protein FtsE -
  H0507_RS05405 (STHERMO_1176) queG 1011280..1012398 (-) 1119 WP_059257434.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=1009136 H0507_RS05385 WP_011226072.1 1007789..1008271(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_29]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1009136 H0507_RS05385 WP_011226072.1 1007789..1008271(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_29]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment