Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ABKA15_RS07685 Genome accession   NZ_CP157941
Coordinates   1565198..1567156 (-) Length   652 a.a.
NCBI ID   WP_350015338.1    Uniprot ID   A0AAU7PYT0
Organism   Streptococcus sp. KHUD_010     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1560198..1572156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS07650 (ABKA15_07645) - 1560964..1561425 (-) 462 Protein_1500 GNAT family N-acetyltransferase -
  ABKA15_RS07655 (ABKA15_07650) - 1561530..1562411 (-) 882 WP_003025917.1 class II fructose-bisphosphate aldolase -
  ABKA15_RS07660 (ABKA15_07655) - 1562591..1563525 (-) 935 Protein_1502 IS30 family transposase -
  ABKA15_RS07670 (ABKA15_07665) - 1563883..1564293 (-) 411 WP_003073787.1 effector binding domain-containing protein -
  ABKA15_RS07675 (ABKA15_07670) - 1564344..1564910 (-) 567 Protein_1504 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
  ABKA15_RS07685 (ABKA15_07680) amiA3 1565198..1567156 (-) 1959 WP_350015338.1 peptide ABC transporter substrate-binding protein Regulator
  ABKA15_RS07690 (ABKA15_07685) mraY 1567683..1568666 (-) 984 WP_049514309.1 phospho-N-acetylmuramoyl-pentapeptide- transferase -
  ABKA15_RS07695 (ABKA15_07690) pbp2X 1568668..1570923 (-) 2256 WP_186832778.1 penicillin-binding protein PBP2X -
  ABKA15_RS07700 (ABKA15_07695) ftsL 1570927..1571247 (-) 321 WP_003031041.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72368.53 Da        Isoelectric Point: 8.2689

>NTDB_id=1009136 ABKA15_RS07685 WP_350015338.1 1565198..1567156(-) (amiA3) [Streptococcus sp. KHUD_010]
MKSSKWIIATGVVLSAGILLSGCGKSASSTSTYSYVYTQDPDTLNYLMANRATTSDVVTNLVDGLLENDQYGNLVPSLAK
SWTVSKDGLTYTYKLRKDAKWYTSEGEEYANVKAQDFVTGLKYAADNKSEALYLVQDSVKGLDAYIKGETKDFSTVGVKA
LDDYTVQYTLSRAETYWNSKTTNNILFPVNADFLKSQGKNFGSVKPTSILYNGPYLLKSLTAKSSMEFAKNPHYYDKKNV
HLDNIKLTYYDGSDQEALIRNFTDGAYSAARLYPNSSSFASVKKQYANNIIYSLQDATSYYYNFNLNRQSYNHTSKKTDA
QKAATQEAVLNKAFRQAINFAYNRTSYGAQSNGKDGATKVLRNTLVPPTFVSIGDKTFGDVVSSKLVNYGSEWSNMNLAD
AQDAYYNPEKAKAKFAQAKAELQAKGVQFPIHLDVPAGQTSKTGVQWESSMKQSVESVLGTENVVIDIQQMSSDELNNIS
YFANTAAQKDYDLYNGGWSGDYQDPSTYLDTLNTKNGGSLQNFGLEPGQENDKIKAVGLDTYTEMLAEANAETNEATRYE
KYAEAQAWLIDSGLTMPNLSLGGTPSVTKTVPFSRSYSLVGIKGGSSNYFKYVKLQDKIVTTKEYESAKKKWLKEKEISN
KKAQDNYENHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=1009136 ABKA15_RS07685 WP_350015338.1 1565198..1567156(-) (amiA3) [Streptococcus sp. KHUD_010]
ATGAAATCATCAAAATGGATTATTGCAACAGGAGTTGTGCTAAGTGCTGGAATCCTATTATCAGGCTGTGGCAAGTCAGC
TTCTAGCACATCAACTTATTCATACGTGTATACACAAGATCCAGATACGCTAAATTATCTGATGGCGAACCGTGCGACAA
CATCAGATGTTGTGACTAACTTAGTTGATGGATTATTGGAAAATGACCAATACGGAAATTTAGTTCCGTCGCTGGCTAAG
TCATGGACAGTCTCCAAAGATGGCTTGACGTACACGTATAAATTACGTAAAGATGCTAAATGGTACACATCAGAAGGTGA
AGAGTACGCAAATGTAAAAGCGCAAGACTTTGTAACTGGTTTGAAATACGCCGCAGATAATAAATCAGAAGCCCTTTACC
TCGTTCAAGATTCTGTCAAAGGTTTGGATGCTTACATCAAGGGGGAAACGAAAGATTTTTCAACAGTTGGAGTAAAAGCT
CTAGATGACTATACAGTACAGTATACACTCAGCCGTGCAGAGACTTATTGGAATTCAAAAACGACCAATAATATCCTCTT
CCCAGTCAATGCAGATTTCTTGAAATCACAAGGAAAGAATTTTGGTTCTGTAAAACCAACCAGCATTCTATACAATGGTC
CTTATCTATTGAAGTCTCTGACAGCCAAGTCTTCTATGGAATTTGCTAAAAATCCTCATTACTATGATAAAAAGAATGTT
CATTTGGATAACATTAAATTGACATATTATGACGGATCTGACCAAGAAGCCCTTATCCGTAACTTCACAGATGGTGCCTA
TAGTGCAGCTCGTCTATATCCAAATAGCTCTAGTTTTGCTTCTGTTAAAAAACAATATGCTAACAATATCATCTATAGTT
TGCAAGATGCGACCAGCTACTATTATAACTTTAACTTAAATCGTCAGTCTTACAACCATACATCTAAGAAAACAGATGCT
CAAAAGGCTGCGACACAAGAAGCGGTGCTAAATAAAGCTTTCCGCCAAGCTATCAACTTTGCCTATAATCGTACTTCTTA
TGGTGCACAAAGTAATGGGAAAGACGGAGCGACAAAGGTATTGCGGAACACACTCGTGCCACCAACATTTGTTTCTATCG
GTGATAAAACGTTTGGTGATGTTGTGTCTTCTAAATTGGTAAACTATGGCTCAGAATGGTCAAATATGAATTTGGCCGAT
GCACAAGATGCTTATTACAATCCAGAAAAAGCCAAGGCGAAGTTTGCTCAAGCTAAAGCAGAATTGCAAGCAAAGGGTGT
TCAGTTCCCTATACACTTAGATGTACCGGCTGGTCAGACAAGTAAAACTGGTGTTCAATGGGAAAGTTCCATGAAGCAAT
CTGTTGAGTCTGTCTTGGGCACAGAAAATGTTGTCATTGATATTCAACAAATGAGTTCAGATGAATTAAATAATATCAGT
TATTTTGCTAATACAGCTGCTCAAAAGGACTATGATCTGTATAATGGTGGTTGGTCTGGTGACTATCAAGACCCATCTAC
TTATTTAGATACATTGAATACAAAAAATGGTGGTAGTTTACAAAACTTCGGTTTGGAACCAGGTCAAGAAAATGATAAGA
TTAAGGCAGTTGGACTGGACACATATACAGAGATGCTAGCAGAAGCAAATGCTGAAACCAATGAAGCTACACGCTATGAA
AAATATGCCGAAGCGCAAGCGTGGTTGATTGATAGCGGTTTAACAATGCCCAATCTTTCTCTTGGAGGAACGCCGTCTGT
GACGAAAACAGTTCCATTTAGCCGTTCTTATTCATTAGTTGGAATCAAAGGAGGCTCAAGCAATTACTTTAAATATGTCA
AATTGCAAGACAAAATTGTAACAACAAAAGAATACGAAAGTGCTAAAAAGAAATGGCTAAAAGAAAAAGAAATCTCTAAT
AAAAAAGCACAAGATAACTATGAAAATCATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

57.686

100

0.581
  amiA3 Streptococcus thermophilus LMG 18311

57.382

100

0.578
  amiA Streptococcus salivarius strain HSISS4

57.078

100

0.575

Multiple sequence alignment