Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABNP43_RS14885 Genome accession   NZ_CP157878
Coordinates   2850417..2852723 (-) Length   768 a.a.
NCBI ID   WP_349925027.1    Uniprot ID   -
Organism   Bacillus altitudinis strain SCu11     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2845417..2857723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP43_RS14845 (ABNP43_14830) - 2845823..2846254 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  ABNP43_RS14850 (ABNP43_14835) - 2846254..2846595 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  ABNP43_RS14855 (ABNP43_14840) - 2846588..2848066 (+) 1479 WP_019744043.1 Na+/H+ antiporter subunit D -
  ABNP43_RS14860 (ABNP43_14845) - 2848073..2848552 (+) 480 WP_341042046.1 Na+/H+ antiporter subunit E -
  ABNP43_RS14865 (ABNP43_14850) - 2848552..2848833 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  ABNP43_RS14870 (ABNP43_14855) mnhG 2848817..2849191 (+) 375 WP_035701201.1 monovalent cation/H(+) antiporter subunit G -
  ABNP43_RS14875 (ABNP43_14860) - 2849282..2849671 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  ABNP43_RS14880 (ABNP43_14865) comA 2849695..2850336 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  ABNP43_RS14885 (ABNP43_14870) comP 2850417..2852723 (-) 2307 WP_349925027.1 ATP-binding protein Regulator
  ABNP43_RS14890 (ABNP43_14875) comX 2852737..2852907 (-) 171 WP_017358941.1 competence pheromone ComX -
  ABNP43_RS14895 (ABNP43_14880) - 2852885..2853808 (-) 924 WP_035389264.1 polyprenyl synthetase family protein -
  ABNP43_RS14900 (ABNP43_14885) degQ 2853960..2854100 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  ABNP43_RS14905 (ABNP43_14890) - 2854606..2854959 (+) 354 WP_019744042.1 hypothetical protein -
  ABNP43_RS14910 (ABNP43_14895) - 2854996..2856222 (-) 1227 WP_349926160.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88562.28 Da        Isoelectric Point: 8.4477

>NTDB_id=1008837 ABNP43_RS14885 WP_349925027.1 2850417..2852723(-) (comP) [Bacillus altitudinis strain SCu11]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSHGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISAFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVLFDFIQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSIFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKDYVDQFQVILGEVGKIIG
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDDGV
GFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=1008837 ABNP43_RS14885 WP_349925027.1 2850417..2852723(-) (comP) [Bacillus altitudinis strain SCu11]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATCCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAGGAAAATAGTCACGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGGAAAGGCGATATCATACTTGAAGTGAATGGGAATAAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGAGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAAATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTGACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCAGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTCTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCAGCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCGTATGTTGTTGCATCGTTTGTTCTTTTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGCTATATAATGTTGATTTCTTTATGGGAAGGATTAAATACTACGGTTTTTTAGCAATTACACCAACAATACT
AGTGGTTGTTCTTTTTGATTTTATTCAAAAGCCAAATGCAAATTTCTATACAGTGAAATTTACGATTATCACGTACATTC
TTATGCTTACCGTCTTCTACTTTAAAGAAATTATCGATTTCCGTTTTCGATTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTATATTTAAATTCACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGACCAATTTCAAGTTATTTTAGGTGAAGTTGGTAAAATCATCGGG
TTGGATAAAGGATTCATGATGAAAATTGGTGAGCGGGGTGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTACGGAC
ACCTAAGCTGACCCGCGATGAAATCTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCA
AAATCGAAGAGTTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCTGCCTGGCTGAAGAAAGTCATGTTC
GCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACTGAAGAG
ACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTGGGGTTA
GTAAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCGCTTTGA
TAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGTTGAAGC
ATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGATGGAGTC
GGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGCTCTAAA
TGGAAAGCTTCAAATTCACACGGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.292

100

0.499


Multiple sequence alignment