Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABNP33_RS03280 Genome accession   NZ_CP157872
Coordinates   665121..665504 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain bac73     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 660121..670504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP33_RS03270 (ABNP33_03270) nolF 663023..664129 (-) 1107 WP_075383777.1 efflux RND transporter periplasmic adaptor subunit -
  ABNP33_RS03275 (ABNP33_03275) - 664198..664836 (-) 639 WP_262728204.1 hypothetical protein -
  ABNP33_RS03280 (ABNP33_03280) pilG 665121..665504 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  ABNP33_RS03285 (ABNP33_03285) pilH 665527..665889 (+) 363 WP_002116220.1 response regulator -
  ABNP33_RS03290 (ABNP33_03290) pilI 665950..666486 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  ABNP33_RS03295 (ABNP33_03295) pilJ 666529..668607 (+) 2079 WP_032036912.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=1008689 ABNP33_RS03280 WP_000389061.1 665121..665504(+) (pilG) [Acinetobacter pittii strain bac73]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1008689 ABNP33_RS03280 WP_000389061.1 665121..665504(+) (pilG) [Acinetobacter pittii strain bac73]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCGGAAACCTTATT
GCAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment