Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABNP33_RS01645 | Genome accession | NZ_CP157872 |
| Coordinates | 347089..347571 (+) | Length | 160 a.a. |
| NCBI ID | WP_069030420.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain bac73 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 342089..352571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNP33_RS01635 (ABNP33_01635) | pilX | 342403..343212 (+) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABNP33_RS01640 (ABNP33_01640) | pilY1 | 343224..347078 (+) | 3855 | WP_262440245.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ABNP33_RS01645 (ABNP33_01645) | pilY2 | 347089..347571 (+) | 483 | WP_069030420.1 | type IV pilin protein | Machinery gene |
| ABNP33_RS01650 (ABNP33_01650) | pilE | 347568..347993 (+) | 426 | WP_349913984.1 | type IV pilin protein | Machinery gene |
| ABNP33_RS01655 (ABNP33_01655) | rpsP | 348141..348392 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABNP33_RS01660 (ABNP33_01660) | rimM | 348412..348960 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| ABNP33_RS01665 (ABNP33_01665) | trmD | 349003..349758 (+) | 756 | WP_349913985.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABNP33_RS01670 (ABNP33_01670) | rplS | 349978..350346 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| ABNP33_RS01675 (ABNP33_01675) | lip | 350398..351339 (-) | 942 | WP_080591800.1 | triacylglycerol lipase | - |
| ABNP33_RS01680 (ABNP33_01680) | - | 351455..352486 (-) | 1032 | WP_206221704.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17516.77 Da Isoelectric Point: 8.4721
>NTDB_id=1008684 ABNP33_RS01645 WP_069030420.1 347089..347571(+) (pilY2) [Acinetobacter pittii strain bac73]
MNKYYIQRFNQGVTLIELMVVIVIVAILASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAILASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1008684 ABNP33_RS01645 WP_069030420.1 347089..347571(+) (pilY2) [Acinetobacter pittii strain bac73]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAACTCATGGTTGTCATCGTGATTGTGGCTAT
TCTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAATTGGAAAGGCATAAATCCAAGAACTTTACTTATAGAGGATTTACCACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACAAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAACTCATGGTTGTCATCGTGATTGTGGCTAT
TCTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAATTGGAAAGGCATAAATCCAAGAACTTTACTTATAGAGGATTTACCACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACAAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.113 |
100 |
0.444 |