Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABNP33_RS01620 | Genome accession | NZ_CP157872 |
| Coordinates | 340378..340851 (+) | Length | 157 a.a. |
| NCBI ID | WP_262440243.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain bac73 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 335378..345851
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNP33_RS01595 (ABNP33_01595) | spoT | 335840..337945 (-) | 2106 | WP_262440242.1 | HD domain-containing protein | - |
| ABNP33_RS01600 (ABNP33_01600) | - | 337961..338116 (-) | 156 | Protein_306 | hypothetical protein | - |
| ABNP33_RS01605 (ABNP33_01605) | rpoZ | 338155..338433 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| ABNP33_RS01610 (ABNP33_01610) | gmk | 338506..339135 (-) | 630 | WP_002116973.1 | guanylate kinase | - |
| ABNP33_RS01615 (ABNP33_01615) | ispH | 339258..340208 (+) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABNP33_RS01620 (ABNP33_01620) | fimU | 340378..340851 (+) | 474 | WP_262440243.1 | GspH/FimT family pseudopilin | Machinery gene |
| ABNP33_RS01625 (ABNP33_01625) | pilV | 340845..341405 (+) | 561 | WP_262440244.1 | type IV pilus modification protein PilV | Machinery gene |
| ABNP33_RS01630 (ABNP33_01630) | pilW | 341405..342406 (+) | 1002 | WP_069030422.1 | PilW family protein | Machinery gene |
| ABNP33_RS01635 (ABNP33_01635) | pilX | 342403..343212 (+) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16969.65 Da Isoelectric Point: 7.7942
>NTDB_id=1008679 ABNP33_RS01620 WP_262440243.1 340378..340851(+) (fimU) [Acinetobacter pittii strain bac73]
MRGIIPQDGFTLVELMVTIAIMAIISMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAIMAIISMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1008679 ABNP33_RS01620 WP_262440243.1 340378..340851(+) (fimU) [Acinetobacter pittii strain bac73]
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGATCATGGCTATTATCTCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CAGAAGCAAAGAACCAAGCCATACTTGGTCGACAGGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAATATCACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGATCATGGCTATTATCTCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CAGAAGCAAAGAACCAAGCCATACTTGGTCGACAGGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAATATCACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
86.624 |
100 |
0.866 |