Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | H1D11_RS02425 | Genome accession | NZ_LR778147 |
| Coordinates | 542744..543334 (+) | Length | 196 a.a. |
| NCBI ID | WP_000633668.1 | Uniprot ID | P0AGA7 |
| Organism | Escherichia coli isolate SC418 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 537744..548334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1D11_RS02410 | ilvN | 538987..539277 (+) | 291 | WP_001181706.1 | acetolactate synthase small subunit | - |
| H1D11_RS02415 | - | 540355..540837 (+) | 483 | WP_143365296.1 | hypothetical protein | - |
| H1D11_RS02420 | - | 541113..542582 (+) | 1470 | WP_048970198.1 | hypothetical protein | - |
| H1D11_RS02425 | letA | 542744..543334 (+) | 591 | WP_000633668.1 | transcriptional regulator UhpA | Regulator |
| H1D11_RS02430 | uhpB | 543334..544836 (+) | 1503 | WP_048970199.1 | signal transduction histidine-protein kinase/phosphatase UhpB | - |
| H1D11_RS02435 | uhpC | 544846..546165 (+) | 1320 | WP_115423708.1 | MFS transporter family glucose-6-phosphate receptor UhpC | - |
| H1D11_RS02440 | uhpT | 546421..547812 (+) | 1392 | WP_000879199.1 | hexose-6-phosphate:phosphate antiporter | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 20889.30 Da Isoelectric Point: 5.9982
>NTDB_id=1008178 H1D11_RS02425 WP_000633668.1 542744..543334(+) (letA) [Escherichia coli isolate SC418]
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV
HDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV
HDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW
Nucleotide
Download Length: 591 bp
>NTDB_id=1008178 H1D11_RS02425 WP_000633668.1 542744..543334(+) (letA) [Escherichia coli isolate SC418]
ATGATCACCGTTGCCCTTATAGACGATCACCTCATCGTCCGCTCCGGCTTTGCGCAGTTGCTGGGGCTGGAACCTGATTT
GCAAGTAGTTGCCGAGTTTGGTTCGGGGCGCGAGGCGCTGGCGGGGTTGCCGGGGCGCGGTGTGCAGGTGTGTATTTGCG
ATATCTCCATGCCTGATATCTCCGGTCTGGAGCTGCTAAGCCAGCTGCCGAAAGGTATGGCGACGATTATGCTCTCTGTT
CATGACAGTCCGGCGCTGGTTGAGCAGGCGCTTAACGCGGGGGCGCGCGGCTTTCTCTCCAAACGCTGTAGCCCGGATGA
ACTGATTGCTGCGGTGCATACGGTTGCCACGGGCGGCTGTTATCTGACGCCGGATATTGCCATTAAACTGGCATCCGGTC
GCCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGCGGTGAAAGAGATTGCCGCC
GAACTGGGCTTGTCACCGAAAACGGTACACGTCCATCGCGCCAATCTGATGGAAAAACTGGGCGTCAGTAACGACGTTGA
ACTGGCGCGCCGCATGTTTGATGGCTGGTGA
ATGATCACCGTTGCCCTTATAGACGATCACCTCATCGTCCGCTCCGGCTTTGCGCAGTTGCTGGGGCTGGAACCTGATTT
GCAAGTAGTTGCCGAGTTTGGTTCGGGGCGCGAGGCGCTGGCGGGGTTGCCGGGGCGCGGTGTGCAGGTGTGTATTTGCG
ATATCTCCATGCCTGATATCTCCGGTCTGGAGCTGCTAAGCCAGCTGCCGAAAGGTATGGCGACGATTATGCTCTCTGTT
CATGACAGTCCGGCGCTGGTTGAGCAGGCGCTTAACGCGGGGGCGCGCGGCTTTCTCTCCAAACGCTGTAGCCCGGATGA
ACTGATTGCTGCGGTGCATACGGTTGCCACGGGCGGCTGTTATCTGACGCCGGATATTGCCATTAAACTGGCATCCGGTC
GCCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGCGGTGAAAGAGATTGCCGCC
GAACTGGGCTTGTCACCGAAAACGGTACACGTCCATCGCGCCAATCTGATGGAAAAACTGGGCGTCAGTAACGACGTTGA
ACTGGCGCGCCGCATGTTTGATGGCTGGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
38.5 |
100 |
0.393 |
| letA | Legionella pneumophila strain ERS1305867 |
38.5 |
100 |
0.393 |
| degU | Bacillus subtilis subsp. subtilis str. 168 |
33.184 |
100 |
0.378 |