Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ABKJ27_RS08110 Genome accession   NZ_CP157578
Coordinates   1678371..1679381 (-) Length   336 a.a.
NCBI ID   WP_001090628.1    Uniprot ID   F9HAD8
Organism   Streptococcus sp. KHUD_011     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1673371..1684381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKJ27_RS08085 (ABKJ27_08095) - 1673475..1674689 (-) 1215 WP_000666457.1 pyridoxal phosphate-dependent aminotransferase -
  ABKJ27_RS08090 (ABKJ27_08100) - 1674845..1675147 (-) 303 WP_049546665.1 hypothetical protein -
  ABKJ27_RS08095 (ABKJ27_08105) - 1675309..1675761 (+) 453 WP_000079148.1 universal stress protein -
  ABKJ27_RS08100 (ABKJ27_08110) - 1675898..1677289 (-) 1392 WP_049546429.1 Cof-type HAD-IIB family hydrolase -
  ABKJ27_RS08105 (ABKJ27_08115) - 1677355..1678317 (+) 963 WP_049546430.1 asparaginase -
  ABKJ27_RS08110 (ABKJ27_08120) ccpA 1678371..1679381 (-) 1011 WP_001090628.1 catabolite control protein A Regulator
  ABKJ27_RS08115 (ABKJ27_08125) - 1679620..1679937 (+) 318 WP_033681210.1 DUF960 domain-containing protein -
  ABKJ27_RS08120 (ABKJ27_08130) folK 1680097..1680909 (-) 813 WP_410011656.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  ABKJ27_RS08125 (ABKJ27_08135) folE 1680952..1681506 (-) 555 WP_000380917.1 GTP cyclohydrolase I FolE -
  ABKJ27_RS08130 (ABKJ27_08140) - 1681487..1682809 (-) 1323 WP_410011657.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  ABKJ27_RS08135 (ABKJ27_08145) folP 1682812..1683789 (-) 978 WP_410011658.1 dihydropteroate synthase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37155.16 Da        Isoelectric Point: 5.3350

>NTDB_id=1007484 ABKJ27_RS08110 WP_001090628.1 1678371..1679381(-) (ccpA) [Streptococcus sp. KHUD_011]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVTYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGISYSEGLVFESKYTYEDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEEFEIITSDDSQVSRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=1007484 ABKJ27_RS08110 WP_001090628.1 1678371..1679381(-) (ccpA) [Streptococcus sp. KHUD_011]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGAGTTTCAATGGCGACGGTTAGCCGTGTAGT
CAATGGCAATAAGAATGTAAAAGAGAATACTCGAAAAAAAGTGCTTGAGGTGATTGACCGTTTGGATTACCGTCCAAATG
CAGTGGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTGGTGATACCAAATATTACCAATGGCTATTTCTCA
ACGCTTGCTAAAGGGATTGATGATATCGCTGAAATGTACAAGTACAATATTGTCCTTGCCAATAGTGATGAGGATGATGA
CAAGGAAGTTTCAGTGGTCAATACACTGTTTTCTAAGCAAGTGGATGGTATCATCTTTATGGGATATCACTTGACTGAAA
AAATTCGTTCAGAGTTTTCTCGCTCTCGGACACCAGTTGTTCTTGCAGGAACTGTGGATGTAGAACATCAGCTTCCAAGT
GTCAATATTGACTACAAACAAGCTACGATTGATGCAGTGACCTACCTTGCTAAAGAAAATGAGCGCATTGCTTTCGTTAG
CGGTCCACTAGTGGATGATATCAATGGTAAGGTTCGTTTGGTTGGCTACAAGGAAGCCTTGAAAAAAGCAGGTATTTCTT
ATAGCGAAGGATTGGTATTTGAATCTAAATACACTTATGAAGACGGTTATGCCTTGGCAGAACGCTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTAACAGGTGATGAGTTGGCAGCAGGTGTTTTGAATGGCCTTGCTGATAAGGGTGTGTCAGTACC
AGAAGAATTTGAAATCATTACTAGTGATGATTCGCAAGTCTCACGCTTTACCCGTCCAAACTTGACAACTATTGCCCAAC
CTCTCTATGACCTTGGTGCTATTAGTATGCGTATGTTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTCGTTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HAD8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

95.238

100

0.952

  ccpA Streptococcus gordonii str. Challis substr. CH1

89.222

99.405

0.887

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment