Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ABLU28_RS03625 | Genome accession | NZ_CP157495 |
| Coordinates | 714174..714470 (+) | Length | 98 a.a. |
| NCBI ID | WP_010906316.1 | Uniprot ID | A0A3N6L9Y1 |
| Organism | Lactococcus lactis strain 2B-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 709174..719470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLU28_RS03605 (ABLU28_03605) | comGA | 711509..712447 (+) | 939 | WP_058212859.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABLU28_RS03610 (ABLU28_03610) | comGB | 712395..713414 (+) | 1020 | Protein_666 | competence type IV pilus assembly protein ComGB | - |
| ABLU28_RS03615 (ABLU28_03615) | comGC | 713428..713811 (+) | 384 | WP_010906318.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABLU28_RS03620 (ABLU28_03620) | comGD | 713786..714202 (+) | 417 | WP_021216554.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABLU28_RS03625 (ABLU28_03625) | comGE | 714174..714470 (+) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABLU28_RS03630 (ABLU28_03630) | comGF | 714433..714879 (+) | 447 | WP_029344525.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABLU28_RS03635 (ABLU28_03635) | comGG | 714918..715202 (+) | 285 | WP_010906314.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABLU28_RS03640 (ABLU28_03640) | - | 715283..715720 (+) | 438 | WP_058213216.1 | zinc-dependent MarR family transcriptional regulator | - |
| ABLU28_RS03645 (ABLU28_03645) | - | 715717..716559 (+) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| ABLU28_RS03650 (ABLU28_03650) | - | 716736..717473 (+) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| ABLU28_RS03655 (ABLU28_03655) | - | 717466..718275 (+) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| ABLU28_RS03660 (ABLU28_03660) | - | 718314..719180 (-) | 867 | WP_058213299.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11076.95 Da Isoelectric Point: 6.4684
>NTDB_id=1007182 ABLU28_RS03625 WP_010906316.1 714174..714470(+) (comGE) [Lactococcus lactis strain 2B-1]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=1007182 ABLU28_RS03625 WP_010906316.1 714174..714470(+) (comGE) [Lactococcus lactis strain 2B-1]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
68.041 |
98.98 |
0.673 |