Detailed information NTG1007152

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: GPW69_RS05055
• Genome accession: NZ_LR738724
• Coordinates: 1017135..1017833 (-)
• Length: 232 a.a.
• NCBI ID: WP_002935052.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 9401240
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1012135..1022833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPW69_RS05035	-	1013061..1013420 (+)	360	WP_002935059.1	SAG1252 family conjugative relaxosome accessory protein	-
GPW69_RS05040	mobC	1013430..1013795 (+)	366	WP_018163914.1	plasmid mobilization relaxosome protein MobC	-
GPW69_RS05045	-	1013782..1015641 (+)	1860	WP_024394872.1	SAG1250 family conjugative relaxase	-
GPW69_RS05050	-	1015764..1017119 (-)	1356	WP_002935054.1	sensor histidine kinase	-
GPW69_RS05055	scnR	1017135..1017833 (-)	699	WP_002935052.1	response regulator transcription factor	Regulator
GPW69_RS05060	-	1018188..1018343 (+)	156	WP_002935049.1	lacticin 481 family lantibiotic	-
GPW69_RS05065	-	1018372..1018527 (+)	156	WP_002935048.1	lacticin 481 family lantibiotic	-
GPW69_RS05070	-	1019066..1019233 (+)	168	WP_074391117.1	lacticin 481 family lantibiotic	-
GPW69_RS05075	-	1019252..1022032 (+)	2781	WP_024394871.1	type 2 lanthipeptide synthetase LanM family protein	-

Sequence

Protein

• Length: 232 a.a.
• Molecular weight: 26300.45 Da
• Isoelectric Point: 5.1495

>NTDB_id=1007152 GPW69_RS05055 WP_002935052.1 1017135..1017833(-) (scnR) [Streptococcus suis isolate 9401240]
MGFEIQLLNKHILIVDDDIALSESIKEVLMSRGFKNISFAYSISEGIDIFSVSQIDLIILDVMLPDGEGYLLSKYVRKTS
DVPILFLTAKNNPDDEINGLDSGGDDYVTKPFLPKSLTYRIMALLRRAYRDESELIELTDCTIDLNNASVKKSNQNFSLT
PTEIQILRKLFTNKNYIVSTETICDTIWGLDSFGYEKSLMVHIRNIREKIEIIPSKPKHLITVKGLGYKLAI

Nucleotide

• Length: 699 bp

>NTDB_id=1007152 GPW69_RS05055 WP_002935052.1 1017135..1017833(-) (scnR) [Streptococcus suis isolate 9401240]
ATGGGTTTTGAAATACAATTGTTGAATAAACATATACTAATTGTGGATGATGACATCGCATTAAGCGAATCAATCAAAGA
AGTGCTCATGAGTCGTGGCTTCAAAAATATTAGTTTTGCTTATAGTATTAGCGAAGGTATTGATATTTTTTCAGTATCTC
AAATTGATTTAATTATTCTAGATGTCATGTTACCAGATGGTGAAGGCTATTTACTTTCCAAATATGTAAGAAAGACATCT
GATGTCCCAATTCTATTCTTAACTGCTAAAAATAATCCTGATGATGAAATAAATGGGCTTGACTCAGGAGGAGATGACTA
TGTTACAAAGCCATTTTTACCTAAATCTTTAACTTACCGTATAATGGCATTGTTGAGAAGAGCTTACCGAGATGAATCTG
AACTCATTGAATTAACAGATTGCACAATTGACTTGAATAATGCAAGCGTAAAAAAAAGTAATCAAAATTTTTCACTGACC
CCTACTGAAATTCAAATTCTTAGAAAGCTATTTACCAACAAAAATTACATCGTTTCCACAGAGACAATATGTGATACTAT
TTGGGGATTAGATAGCTTTGGATATGAAAAATCCTTAATGGTCCATATACGCAATATTCGAGAAAAAATCGAAATTATAC
CTTCCAAGCCAAAGCATCTAATTACCGTTAAAGGGCTTGGATATAAACTTGCTATTTAA

Domains

Predicted by InterProScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (155-230)

• Response regulator receiver domain (Response_reg) (12-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	42.152	96.121	0.405
vicR	Streptococcus mutans UA159	38.428	98.707	0.379
micA	Streptococcus pneumoniae Cp1015	37.719	98.276	0.371