Detailed information NTG1007110

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: GPW69_RS00390
• Genome accession: NZ_LR738724
• Coordinates: 64566..65156 (+)
• Length: 196 a.a.
• NCBI ID: WP_074391042.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 9401240
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 59566..70156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPW69_RS00380	-	60949..62472 (+)	1524	WP_074391040.1	quinol oxidase	-
GPW69_RS00385	hexB	62590..64527 (+)	1938	WP_074391041.1	DNA mismatch repair endonuclease MutL	Machinery gene
GPW69_RS00390	ruvA	64566..65156 (+)	591	WP_074391042.1	Holliday junction branch migration protein RuvA	Machinery gene
GPW69_RS00400	-	65764..66333 (+)	570	WP_044692561.1	DNA-3-methyladenine glycosylase I	-
GPW69_RS00405	cinA	66370..67551 (+)	1182	WP_074391043.1	competence/damage-inducible protein A	Machinery gene
GPW69_RS00410	recA	67603..68754 (+)	1152	WP_024388019.1	recombinase RecA	Machinery gene
GPW69_RS00415	spx	68990..69388 (+)	399	WP_002939362.1	transcriptional regulator Spx	-
GPW69_RS00420	-	69488..69754 (+)	267	WP_002939360.1	IreB family regulatory phosphoprotein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21764.14 Da
• Isoelectric Point: 5.7417

>NTDB_id=1007110 GPW69_RS00390 WP_074391042.1 64566..65156(+) (ruvA) [Streptococcus suis isolate 9401240]
MYYYIKGILTKITAKYIVVETHGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVISEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFDGTNDTAENYIKSALKMLMK

Nucleotide

• Length: 591 bp

>NTDB_id=1007110 GPW69_RS00390 WP_074391042.1 64566..65156(+) (ruvA) [Streptococcus suis isolate 9401240]
ATGTACTACTATATTAAAGGAATTTTAACGAAAATAACTGCAAAATACATTGTGGTAGAAACGCATGGAGTAGGCTATAT
CTTGCAGGTTGCTAACCCTTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGTG
AAGATGCTCATCTGCTTTACGGATTTGCGACTGAGAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTCGATGATAATGATGGGCTTGTTCGTGCCATTGAGCAGAAAAACATTAC
CTACCTGACCAAGTTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACCTGGAAGGCAAGTTTGTTATCA
GCGAAGAAGCTGGTCCTGTCCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTCGAAGAAGCTATGGAAGCCATGGAA
GCTCTTGGCTACCGACCAGCTGAACTCAAGAAAATCAAGAAATTCTTCGACGGCACCAATGACACCGCCGAAAACTACAT
CAAGTCAGCACTTAAAATGTTGATGAAGTGA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (71-127)

• RuvA N terminal domain (RuvA_N) (1-61)

• RuvA, C-terminal domain (RuvA_C) (151-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	75.635	100	0.76
ruvA	Streptococcus pneumoniae D39	75.635	100	0.76
ruvA	Streptococcus pneumoniae TIGR4	75.635	100	0.76
ruvA	Bacillus subtilis subsp. subtilis str. 168	39.409	100	0.408