Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABLB95_RS11670 Genome accession   NZ_CP157451
Coordinates   2494381..2494764 (-) Length   127 a.a.
NCBI ID   WP_005018759.1    Uniprot ID   -
Organism   Acinetobacter radioresistens strain XH1688     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2489381..2499764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLB95_RS11655 (ABLB95_11645) - 2491323..2493404 (-) 2082 WP_005018770.1 methyl-accepting chemotaxis protein -
  ABLB95_RS11660 (ABLB95_11650) - 2493450..2493986 (-) 537 WP_005018769.1 chemotaxis protein CheW -
  ABLB95_RS11665 (ABLB95_11655) - 2493991..2494359 (-) 369 WP_005018768.1 response regulator -
  ABLB95_RS11670 (ABLB95_11660) pilG 2494381..2494764 (-) 384 WP_005018759.1 twitching motility response regulator PilG Regulator
  ABLB95_RS11675 (ABLB95_11665) - 2495102..2495683 (+) 582 WP_005406853.1 hypothetical protein -
  ABLB95_RS11680 (ABLB95_11670) - 2495746..2496873 (+) 1128 WP_138000848.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14269.38 Da        Isoelectric Point: 4.7278

>NTDB_id=1006985 ABLB95_RS11670 WP_005018759.1 2494381..2494764(-) (pilG) [Acinetobacter radioresistens strain XH1688]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSV

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1006985 ABLB95_RS11670 WP_005018759.1 2494381..2494764(-) (pilG) [Acinetobacter radioresistens strain XH1688]
ATGGAAGACAAATTTCAAAACCTTAAGGTTATGGTAATCGATGATTCAAAAACTATTCGCCGTACAGCAGAAACTTTGCT
GCAACGTGAGGGCTGTGAGGTAATTACCGCAGTTGATGGTTTTGAAGCATTGTCCAAGATTGCCGAAGCCAATCCTGATA
TTGTCTTTGTCGATATCATGATGCCGCGTCTAGATGGTTACCAGACCTGTGCACTGATTAAAAACTCACAAAATTATCAG
AATATACCGGTCATTATGCTGTCTAGTAAAGATGGGCTATTTGATCAGGCTAAAGGTCGTGTAGTGGGTTCGGATGAATA
TCTGACCAAACCGTTTAGTAAAGACGAATTGCTCAATGCAATACGTAATCATGTCAGTGTCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.206

99.213

0.984
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment