Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STREPSUIS_RS06105 Genome accession   NZ_LR738722
Coordinates   1196642..1197124 (+) Length   160 a.a.
NCBI ID   WP_024388981.1    Uniprot ID   -
Organism   Streptococcus suis isolate 861160     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1191642..1202124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STREPSUIS_RS06080 - 1192891..1194201 (-) 1311 WP_002938090.1 GntP family permease -
  STREPSUIS_RS06085 folK 1194251..1194739 (-) 489 WP_074390248.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  STREPSUIS_RS06090 folB 1194736..1195098 (-) 363 WP_074390247.1 dihydroneopterin aldolase -
  STREPSUIS_RS06095 folP 1195091..1195903 (-) 813 WP_074390246.1 dihydropteroate synthase -
  STREPSUIS_RS06100 folE 1195912..1196475 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  STREPSUIS_RS06105 mutX 1196642..1197124 (+) 483 WP_024388981.1 NUDIX hydrolase Machinery gene
  STREPSUIS_RS06110 - 1197172..1197849 (-) 678 WP_074390245.1 DUF4956 domain-containing protein -
  STREPSUIS_RS06115 - 1197836..1198579 (-) 744 WP_074390244.1 polyphosphate polymerase domain-containing protein -
  STREPSUIS_RS06120 - 1198772..1199074 (+) 303 WP_024416545.1 hypothetical protein -
  STREPSUIS_RS06125 - 1199095..1199361 (-) 267 WP_024413100.1 DUF2087 domain-containing protein -
  STREPSUIS_RS06130 pheT 1199416..1201815 (-) 2400 WP_074390243.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18525.83 Da        Isoelectric Point: 4.4791

>NTDB_id=1006964 STREPSUIS_RS06105 WP_024388981.1 1196642..1197124(+) (mutX) [Streptococcus suis isolate 861160]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDNLLDYSVNFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1006964 STREPSUIS_RS06105 WP_024388981.1 1196642..1197124(+) (mutX) [Streptococcus suis isolate 861160]
ATGACCAAGAAACCCGTCCAACTCGCTACCATTTGCTACATTGATAATGGCAAGGAATTTCTCCTGCTCCATCGCAATAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGTAAACTAGAACCTGGTGAAACACCGCAAGCCTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAATGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACCTGGGAAGGGGACAGACATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGTTTCCGCTATGATGGGGATAACTTGCTGGATTACAGTGTTAATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.739

95.625

0.763

Multiple sequence alignment