Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABLC01_RS10055 | Genome accession | NZ_CP157442 |
| Coordinates | 2091373..2091753 (-) | Length | 126 a.a. |
| NCBI ID | WP_032057019.1 | Uniprot ID | A0A009RST6 |
| Organism | Acinetobacter pittii strain XH1728 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2086373..2096753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLC01_RS10025 (ABLC01_10025) | tadA | 2086437..2086940 (-) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
| ABLC01_RS10030 (ABLC01_10030) | hibch | 2086946..2088070 (-) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABLC01_RS10035 (ABLC01_10035) | ung | 2088067..2088780 (-) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| ABLC01_RS10040 (ABLC01_10040) | - | 2088834..2089430 (-) | 597 | WP_002121363.1 | 6-carboxytetrahydropterin synthase | - |
| ABLC01_RS10045 (ABLC01_10045) | gspK | 2089658..2090617 (-) | 960 | WP_005076277.1 | type II secretion system minor pseudopilin GspK | - |
| ABLC01_RS10050 (ABLC01_10050) | xcpW | 2090618..2091373 (-) | 756 | WP_032057017.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABLC01_RS10055 (ABLC01_10055) | xcpV | 2091373..2091753 (-) | 381 | WP_032057019.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABLC01_RS10060 (ABLC01_10060) | - | 2091743..2092297 (-) | 555 | WP_005069534.1 | type II secretion system protein | - |
| ABLC01_RS10065 (ABLC01_10065) | - | 2092304..2092912 (-) | 609 | WP_005069536.1 | TetR/AcrR family transcriptional regulator | - |
| ABLC01_RS10070 (ABLC01_10070) | ycfH | 2092949..2093722 (-) | 774 | WP_017399499.1 | TatD family hydrolase | - |
| ABLC01_RS10075 (ABLC01_10075) | pilZ | 2093740..2094081 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| ABLC01_RS10080 (ABLC01_10080) | holB | 2094092..2095072 (-) | 981 | WP_032057020.1 | DNA polymerase III subunit delta' | - |
| ABLC01_RS10085 (ABLC01_10085) | kdsB | 2095086..2095847 (-) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13902.03 Da Isoelectric Point: 9.4463
>NTDB_id=1006883 ABLC01_RS10055 WP_032057019.1 2091373..2091753(-) (xcpV) [Acinetobacter pittii strain XH1728]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1006883 ABLC01_RS10055 WP_032057019.1 2091373..2091753(-) (xcpV) [Acinetobacter pittii strain XH1728]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCCGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCCGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
95.238 |
100 |
0.952 |