Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABLC01_RS03240 Genome accession   NZ_CP157442
Coordinates   662093..662476 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain XH1728     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 657093..667476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLC01_RS03230 (ABLC01_03230) nolF 659992..661101 (-) 1110 WP_080776822.1 efflux RND transporter periplasmic adaptor subunit -
  ABLC01_RS03235 (ABLC01_03235) - 661170..661808 (-) 639 WP_017400247.1 hypothetical protein -
  ABLC01_RS03240 (ABLC01_03240) pilG 662093..662476 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  ABLC01_RS03245 (ABLC01_03245) pilH 662499..662861 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  ABLC01_RS03250 (ABLC01_03250) pilI 662922..663458 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  ABLC01_RS03255 (ABLC01_03255) pilJ 663501..665579 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=1006877 ABLC01_RS03240 WP_000389061.1 662093..662476(+) (pilG) [Acinetobacter pittii strain XH1728]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1006877 ABLC01_RS03240 WP_000389061.1 662093..662476(+) (pilG) [Acinetobacter pittii strain XH1728]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment