Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABLC01_RS01625 | Genome accession | NZ_CP157442 |
| Coordinates | 348259..348741 (+) | Length | 160 a.a. |
| NCBI ID | WP_002116770.1 | Uniprot ID | A0A009RUX0 |
| Organism | Acinetobacter pittii strain XH1728 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 343259..353741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLC01_RS01615 (ABLC01_01615) | pilX | 343573..344382 (+) | 810 | WP_005067126.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABLC01_RS01620 (ABLC01_01620) | pilY1 | 344394..348248 (+) | 3855 | WP_032057269.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ABLC01_RS01625 (ABLC01_01625) | pilY2 | 348259..348741 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| ABLC01_RS01630 (ABLC01_01630) | pilE | 348738..349163 (+) | 426 | WP_002117055.1 | type IV pilin protein | Machinery gene |
| ABLC01_RS01635 (ABLC01_01635) | rpsP | 349311..349562 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABLC01_RS01640 (ABLC01_01640) | rimM | 349582..350130 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| ABLC01_RS01645 (ABLC01_01645) | trmD | 350173..350928 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABLC01_RS01650 (ABLC01_01650) | rplS | 351148..351516 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| ABLC01_RS01655 (ABLC01_01655) | lip | 351568..352509 (-) | 942 | WP_080777126.1 | triacylglycerol lipase | - |
| ABLC01_RS01660 (ABLC01_01660) | - | 352625..353656 (-) | 1032 | WP_032057272.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17520.76 Da Isoelectric Point: 8.4721
>NTDB_id=1006872 ABLC01_RS01625 WP_002116770.1 348259..348741(+) (pilY2) [Acinetobacter pittii strain XH1728]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1006872 ABLC01_RS01625 WP_002116770.1 348259..348741(+) (pilY2) [Acinetobacter pittii strain XH1728]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |