Detailed information NTG1006859

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABLB98_RS14140
• Genome accession: NZ_CP157435
• Coordinates: 2950048..2951229 (+)
• Length: 393 a.a.
• NCBI ID: WP_087547921.1
• Uniprot ID: A0A7Y8U6B6
• Organism: Acinetobacter sp. XH1639
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2945048..2956229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB98_RS14115 (ABLB98_14110)	-	2945695..2946168 (-)	474	WP_087537324.1	hypothetical protein	-
ABLB98_RS14120 (ABLB98_14115)	guaD	2946355..2947671 (+)	1317	WP_348883312.1	guanine deaminase	-
ABLB98_RS14125 (ABLB98_14120)	hpt	2947896..2948423 (+)	528	WP_087537326.1	hypoxanthine phosphoribosyltransferase	-
ABLB98_RS14130 (ABLB98_14125)	-	2948596..2948847 (+)	252	WP_004660536.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
ABLB98_RS14135 (ABLB98_14130)	-	2948907..2949605 (-)	699	WP_348883313.1	DsbC family protein	-
ABLB98_RS14140 (ABLB98_14135)	pilU	2950048..2951229 (+)	1182	WP_087547921.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABLB98_RS14145 (ABLB98_14140)	-	2951304..2951639 (-)	336	WP_256413827.1	hypothetical protein	-
ABLB98_RS14150 (ABLB98_14145)	-	2952197..2952649 (+)	453	WP_348883314.1	hypothetical protein	-
ABLB98_RS14155 (ABLB98_14150)	-	2952732..2953238 (+)	507	WP_348883315.1	hypothetical protein	-
ABLB98_RS14160 (ABLB98_14155)	-	2953349..2953729 (+)	381	WP_348883316.1	hypothetical protein	-
ABLB98_RS14165 (ABLB98_14160)	-	2953750..2954223 (+)	474	WP_348883317.1	hypothetical protein	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 44627.19 Da
• Isoelectric Point: 6.4457

>NTDB_id=1006859 ABLB98_RS14140 WP_087547921.1 2950048..2951229(+) (pilU) [Acinetobacter sp. XH1639]
MYNAELLEEAKTFMFHMLTKVVEYGGSDLFITADFPPSIKLQGLMRPLGQQTLTPEKTKLFAYSLMNEKQRQEFENEWEC
NFAINIPEVSRFRVNVFKQQLQIGMVIRTITSEIPTFQKLKLPESLKNVMMEKRGLVLVVGSTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHTWHHALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIMNFFPDERRNQLLMDLSSNMKAIISQRLVRTQDGQGRRAAVEILLNTPLIAENILKGQFHNLKEIMTKS
RELGMQTFDQALFDLYNEGAISYDEALRNADSLNELRLQIKLKSTRQEGVPASAATSLNMLKEDSEEQEMQGI

Nucleotide

• Length: 1182 bp

>NTDB_id=1006859 ABLB98_RS14140 WP_087547921.1 2950048..2951229(+) (pilU) [Acinetobacter sp. XH1639]
ATGTATAACGCGGAATTATTAGAAGAAGCCAAAACGTTTATGTTTCATATGTTGACCAAAGTGGTTGAATATGGCGGCTC
AGATTTATTCATTACAGCAGACTTTCCACCGAGTATTAAACTCCAAGGTTTAATGCGTCCTTTAGGTCAGCAAACTTTAA
CCCCAGAAAAAACTAAGCTATTTGCATATAGCTTAATGAATGAAAAGCAACGCCAAGAATTTGAAAATGAATGGGAATGT
AATTTCGCAATTAATATTCCAGAAGTATCACGCTTTCGTGTCAATGTATTTAAGCAACAACTACAAATCGGCATGGTTAT
CCGAACCATTACGTCAGAAATCCCAACCTTCCAAAAGCTCAAACTCCCAGAATCATTGAAAAATGTCATGATGGAAAAAC
GTGGCTTAGTATTAGTCGTAGGAAGTACGGGGTCAGGTAAATCTACGTCATTAGCGGCCATGATTGACCATCGTAATGAA
AACTCAGCAGGACATATTATTACGGTCGAAGATCCAGTCGAATATGTTCATAAACATAAAAAATCAATGATTACCCACAG
AGAAGTCGGTGTAGATTGCCATACTTGGCACCATGCTTTAAAAAATACATTGCGTCAGGCACCTGATGTGATTTTGATTG
GTGAAATCCGTGATACTGAAACCATGGAACATGCCATTGCTTTTGCTGAAACTGGGCATTTATGTTTAGGAACTTTACAT
GCCAACAACGCCAATCAAGCATTAGATCGGATCATGAACTTCTTTCCAGATGAACGCCGTAATCAATTGCTGATGGATCT
TTCATCTAATATGAAAGCGATTATTTCTCAACGCTTGGTCCGTACTCAAGATGGTCAAGGTCGTCGTGCAGCCGTAGAGA
TTCTACTGAATACACCATTAATTGCAGAAAATATCTTAAAAGGTCAATTTCATAATCTTAAAGAAATTATGACCAAGTCT
CGTGAATTAGGTATGCAAACTTTTGATCAAGCCTTATTCGATTTATATAACGAAGGCGCAATTAGTTATGATGAAGCGTT
ACGTAATGCTGATTCCTTGAATGAGTTACGCTTACAAATCAAGCTAAAAAGTACTCGTCAAGAAGGAGTTCCAGCTAGTG
CAGCAACTTCTTTAAATATGCTGAAAGAAGACTCTGAAGAGCAAGAAATGCAAGGCATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (116-282)

3D structure

• AlphaFold DB: A0A7Y8U6B6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	60.057	88.55	0.532
pilU	Acinetobacter baylyi ADP1	55.908	88.295	0.494
pilU	Vibrio cholerae strain A1552	51.734	88.041	0.455