Detailed information NTG1006845

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: ABLB98_RS09390
• Genome accession: NZ_CP157435
• Coordinates: 1945620..1948046 (-)
• Length: 808 a.a.
• NCBI ID: WP_348882113.1
• Uniprot ID: A0AB39KG01
• Organism: Acinetobacter sp. XH1639
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1940173..1948820	1945620..1948046	within	0

Gene organization within MGE regions

Location: 1940173..1948820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB98_RS09360 (ABLB98_09355)	purM	1940173..1941243 (+)	1071	WP_348882110.1	phosphoribosylformylglycinamidine cyclo-ligase	-
ABLB98_RS09365 (ABLB98_09360)	purN	1941240..1941869 (+)	630	WP_171063585.1	phosphoribosylglycinamide formyltransferase	-
ABLB98_RS09370 (ABLB98_09365)	-	1941946..1942473 (+)	528	WP_348882111.1	hypothetical protein	-
ABLB98_RS09375 (ABLB98_09370)	-	1942536..1943330 (-)	795	WP_336937354.1	alpha/beta hydrolase	-
ABLB98_RS09380 (ABLB98_09375)	sppA	1943467..1944489 (-)	1023	WP_087546831.1	signal peptide peptidase SppA	-
ABLB98_RS09385 (ABLB98_09380)	-	1944628..1945578 (+)	951	WP_348882112.1	lysophospholipid acyltransferase family protein	-
ABLB98_RS09390 (ABLB98_09385)	comA/comEC	1945620..1948046 (-)	2427	WP_348882113.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABLB98_RS09395 (ABLB98_09390)	lolD	1948134..1948820 (-)	687	WP_050041672.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-

Sequence

Protein

• Length: 808 a.a.
• Molecular weight: 92864.92 Da
• Isoelectric Point: 8.1730

>NTDB_id=1006845 ABLB98_RS09390 WP_348882113.1 1945620..1948046(-) (comA/comEC) [Acinetobacter sp. XH1639]
MLKIILLGWIAGIAIMGFHLDFIELTWWIWLAIAILIFSFGIYKKEFYFYRPFYKALILISASWGLFTTGYHFADSALEQ
RLQLKEFESQSYEAIVYIKNIDELSDDGHKQIAEVLNRHKQSVNWLLYLKQDKYLLNQKQSLELGHYYRVYGQIKPVHSY
AVAGAFDQEKWFLQQNIMSAFSVQSIQPLSFDEIYHLGYQGHLKQQQSFSAKFLLSVEMKRLAFRQMLQTSKLQHKGLLL
ALLTGDESLLSNTLKQQFQQLGISHLLAISGPHVLIFAFMLSWLIQRLIQHYCPHLYLWQPRQILLLLPFLLSVLVYVAF
VGFEIPAIRTLLTALLASIFLFFRQSIRPFSLLIYSASILLLFDPFSILSAGFWLSYGACFILLRVYQTIAQLPQDQPIT
WTQKIFLAAKALVESQSKIFIALLPLVLIFFQQVSWIAPVSNLIAIPLLGGVVVPLDILAACIWLIIPALGQFLFQINDF
VLSILMSILDILQNIAPHLYGVSYTPLMMVSLILGMLILFMPRGTIPKAWALICFLPICIGVKTQPTVLNILDVGQGQAV
FLQHPEQIFMIDTGGSYNENKFSLGERVVIPFIRQQGVRHIDHVILSHLDQDHSGAFPIIQKNFEISQVQSNEYDQKMQF
KNNFSFCQQGQHWSYENLKVEILSPKADELIHAKDQQNEYSCVVYLQFLNAQPYQNFLIMGDAGWEAEYKLMQQYPDLKV
DVLILGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQELKNRLQALHIPLLTTVEAGTIRFIFENGQVELRQQRQ
QIKWLERK

Nucleotide

• Length: 2427 bp

>NTDB_id=1006845 ABLB98_RS09390 WP_348882113.1 1945620..1948046(-) (comA/comEC) [Acinetobacter sp. XH1639]
ATGTTAAAAATTATTTTATTGGGCTGGATTGCTGGTATTGCAATCATGGGATTTCATCTTGATTTTATCGAGCTGACATG
GTGGATTTGGTTGGCTATTGCAATCCTGATCTTTAGCTTTGGCATATACAAGAAAGAATTCTATTTTTATCGACCTTTTT
ATAAAGCACTTATTTTAATCAGTGCAAGCTGGGGATTGTTTACAACAGGATATCATTTTGCAGATTCCGCATTAGAACAA
CGACTGCAATTAAAAGAGTTTGAATCACAATCCTATGAAGCAATTGTTTATATTAAAAATATAGATGAATTGAGTGATGA
TGGTCATAAACAAATTGCTGAAGTGCTTAATCGACATAAGCAATCTGTCAACTGGTTACTTTATTTAAAACAAGACAAAT
ATCTGTTAAATCAGAAGCAAAGCTTAGAGTTGGGTCATTATTATCGAGTTTATGGTCAGATTAAACCAGTGCATAGTTAT
GCTGTTGCGGGTGCATTTGATCAGGAAAAATGGTTTTTGCAGCAAAATATAATGTCTGCATTTTCAGTGCAGTCTATTCA
ACCTTTAAGCTTTGATGAAATTTACCATTTGGGTTATCAAGGTCACTTAAAGCAACAGCAAAGCTTTTCTGCTAAGTTTT
TATTAAGCGTTGAGATGAAACGCTTAGCATTTCGGCAGATGTTGCAAACTTCTAAGCTTCAGCATAAAGGTTTACTTTTA
GCCTTGCTAACAGGTGATGAAAGCCTGTTATCCAACACATTGAAACAACAATTTCAACAGCTTGGAATTTCGCATTTGTT
AGCGATTTCTGGTCCACATGTGTTGATCTTTGCATTCATGTTGTCTTGGTTGATACAACGTCTCATACAGCATTACTGCC
CACATCTATACTTATGGCAGCCTAGACAAATTTTATTATTATTGCCATTTTTACTCAGTGTTCTGGTCTATGTGGCATTT
GTTGGTTTTGAGATTCCAGCGATCAGAACTTTATTGACTGCTTTGCTTGCAAGTATTTTTCTCTTCTTTCGTCAATCGAT
TCGCCCATTTAGCTTATTGATTTATAGTGCCAGTATATTATTACTTTTTGATCCTTTTAGTATTCTATCCGCTGGTTTTT
GGCTGTCATATGGGGCCTGTTTTATTCTACTTAGAGTTTATCAGACCATTGCACAATTACCGCAAGATCAGCCGATTACG
TGGACTCAAAAAATATTTTTAGCTGCTAAAGCTTTGGTTGAATCGCAATCTAAGATTTTTATCGCCTTATTACCATTAGT
CTTGATTTTCTTTCAGCAAGTTTCTTGGATTGCACCTGTAAGTAACTTAATTGCAATTCCTTTACTTGGCGGTGTCGTTG
TGCCATTAGATATTCTGGCTGCATGTATTTGGCTCATCATTCCTGCATTAGGGCAGTTTTTATTTCAAATTAATGATTTT
GTATTATCTATATTGATGTCAATTTTAGACATCTTGCAAAATATTGCACCGCATTTATATGGGGTAAGTTATACACCCTT
AATGATGGTATCTTTAATCCTTGGTATGCTTATTTTATTTATGCCGAGGGGGACGATTCCTAAAGCTTGGGCATTGATTT
GTTTTTTACCTATATGTATAGGTGTAAAGACTCAACCTACGGTTTTAAATATTTTAGATGTTGGACAAGGGCAAGCTGTA
TTTTTACAACATCCCGAGCAAATCTTTATGATTGATACAGGGGGCTCTTACAATGAAAATAAATTTAGTTTAGGAGAGCG
GGTTGTTATTCCATTTATACGGCAACAAGGTGTACGCCACATCGACCATGTAATCTTATCTCATCTTGATCAAGACCATA
GTGGTGCTTTTCCTATTATTCAAAAAAACTTTGAAATATCCCAAGTTCAGTCAAATGAATATGACCAAAAAATGCAGTTC
AAAAACAATTTCTCATTTTGTCAGCAAGGTCAGCATTGGTCATATGAAAATCTAAAAGTTGAAATTCTATCCCCTAAAGC
AGATGAGCTTATTCATGCAAAGGATCAGCAAAATGAGTATTCCTGTGTGGTGTATTTGCAGTTTCTAAATGCCCAGCCTT
ATCAAAACTTCTTAATCATGGGAGATGCAGGTTGGGAGGCTGAATATAAATTAATGCAACAATATCCCGATTTAAAAGTA
GATGTTTTGATCTTGGGACATCACGGGAGTAAACATAGTTCTGCTTATGATTTTTTAGCGACTTTAAAACCGAAACTTGC
GATTGCTTCGGCAGGGTTTGATAATCGTTATGGACATCCTAGTCAAGAGTTGAAAAATCGTCTACAGGCGCTACACATTC
CATTGTTAACTACGGTTGAAGCAGGAACAATTCGTTTTATTTTTGAAAATGGTCAGGTTGAGCTCAGACAGCAAAGACAA
CAAATTAAATGGTTGGAAAGAAAATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (242-521)

• Domain of unknown function (DUF4131) (DUF4131) (23-187)

• Metallo-beta-lactamase superfamily (Lactamase_B) (553-628)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	57.849	100	0.579
comA/comEC	Acinetobacter baumannii strain A118	57.231	100	0.573
comA/comEC	Acinetobacter baylyi ADP1	53.827	100	0.54