Detailed information NTG1006840

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: ABLB98_RS06115
• Genome accession: NZ_CP157435
• Coordinates: 1281043..1281750 (-)
• Length: 235 a.a.
• NCBI ID: WP_004662603.1
• Uniprot ID: A0A7Y8Q8N8
• Organism: Acinetobacter sp. XH1639
• Function: regulate competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1282553..1283786	1281043..1281750	flank	803

Gene organization within MGE regions

Location: 1281043..1283786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB98_RS06115 (ABLB98_06115)	crp	1281043..1281750 (-)	708	WP_004662603.1	cAMP-activated global transcriptional regulator CRP	Regulator
ABLB98_RS06120 (ABLB98_06120)	-	1281898..1282320 (+)	423	WP_004662601.1	OsmC family protein	-
ABLB98_RS06125 (ABLB98_06125)	-	1282389..1282520 (-)	132	Protein_1170	M23 family metallopeptidase	-
ABLB98_RS06130 (ABLB98_06130)	-	1282553..1283786 (-)	1234	Protein_1171	IS3 family transposase	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26536.07 Da
• Isoelectric Point: 4.7361

>NTDB_id=1006840 ABLB98_RS06115 WP_004662603.1 1281043..1281750(-) (crp) [Acinetobacter sp. XH1639]
MTSNFSHLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFENNPQRTAEVRTRDVCEIAEISYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDTSLDDNAFSEDEFDDED

Nucleotide

• Length: 708 bp

>NTDB_id=1006840 ABLB98_RS06115 WP_004662603.1 1281043..1281750(-) (crp) [Acinetobacter sp. XH1639]
ATGACTTCAAATTTTTCACATCTTAGCACTGATGCTTTGTCTCCAGGTCAATTACCTGAGTCAGTTAAAGCATTGCTAAA
ACGTGCTCATATTAATAGATACCCTAAACGCACCACGATTGTTGACGCTGGAACGGAATCAAAATCACTGTATTTAATAT
TAAAAGGTTCAGTGTCAATCATATTACGTGAAGATGATGAGCGTGAAATTGTTGTTGCATATCTCAATCCAGGTGATTTC
TTTGGTGAAATGGGGCTGTTTGAAAATAACCCTCAACGTACCGCAGAAGTACGTACTCGAGATGTTTGCGAAATTGCAGA
AATCTCATATGAAAATTTCCACGAACTCAGCAAGCAATACCCTGACCTGAGCTATGCTGTATTTGCTCAGCTTGTTCGCC
GTCTGAAGAATACAACGCGTAAAGTCACTGACTTAGCATTTATCGATGTATCTGGTCGTATTGCGCGTTGTTTAATTGAC
TTATCTGCGCAGCCTGAGGCAATGATTCTACCGAATGGTCGTCAGATTCGTATTACACGTCAAGAAATTGGTCGTATTGT
GGGGTGTTCACGTGAAATGGTTGGTCGTGTTTTAAAAACACTTGAAGATCAAGGCATGATTCAAACTGATGGTAAAGCAA
TTTTAATTTTTGATACTTCTTTAGATGATAACGCATTTTCTGAAGATGAATTTGATGATGAGGATTAA

Domains

Predicted by InterproScan.

• Crp-like helix-turn-helix domain (HTH_Crp_2) (152-218)

• Cyclic nucleotide-binding domain (cNMP_binding) (33-120)

3D structure

• AlphaFold DB: A0A7Y8Q8N8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Acinetobacter baumannii D1279779	92.766	100	0.928
crp	Vibrio cholerae strain A1552	47.596	88.511	0.421
crp	Haemophilus influenzae Rd KW20	49.223	82.128	0.404