Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABLC00_RS15320 Genome accession   NZ_CP157432
Coordinates   3297558..3297941 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain XH1679     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3292558..3302941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLC00_RS15305 (ABLC00_15305) - 3294447..3296528 (-) 2082 WP_004885376.1 methyl-accepting chemotaxis protein -
  ABLC00_RS15310 (ABLC00_15310) - 3296575..3297111 (-) 537 WP_004885375.1 chemotaxis protein CheW -
  ABLC00_RS15315 (ABLC00_15315) - 3297169..3297531 (-) 363 WP_002051151.1 PleD family two-component system response regulator -
  ABLC00_RS15320 (ABLC00_15320) pilG 3297558..3297941 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  ABLC00_RS15325 (ABLC00_15325) - 3298224..3298862 (+) 639 WP_004885373.1 hypothetical protein -
  ABLC00_RS15330 (ABLC00_15330) - 3298922..3300040 (+) 1119 WP_004885371.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=1006811 ABLC00_RS15320 WP_000389061.1 3297558..3297941(-) (pilG) [Acinetobacter nosocomialis strain XH1679]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1006811 ABLC00_RS15320 WP_000389061.1 3297558..3297941(-) (pilG) [Acinetobacter nosocomialis strain XH1679]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGTGAAGGTTGTGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TCGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTCTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCATTTAGCAAAGATGAATTGTTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment