Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABLB96_RS17695 Genome accession   NZ_CP157428
Coordinates   3686433..3686816 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter sp. XH1741     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3681433..3691816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLB96_RS17680 (ABLB96_17685) - 3683325..3685403 (-) 2079 WP_348896116.1 methyl-accepting chemotaxis protein -
  ABLB96_RS17685 (ABLB96_17690) - 3685450..3685986 (-) 537 WP_348896117.1 chemotaxis protein CheW -
  ABLB96_RS17690 (ABLB96_17695) - 3686047..3686409 (-) 363 WP_009389403.1 PleD family two-component system response regulator -
  ABLB96_RS17695 (ABLB96_17700) pilG 3686433..3686816 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  ABLB96_RS17700 (ABLB96_17705) - 3687099..3687737 (+) 639 WP_348896118.1 hypothetical protein -
  ABLB96_RS17705 (ABLB96_17710) - 3687797..3688915 (+) 1119 WP_348896119.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=1006782 ABLB96_RS17695 WP_000389061.1 3686433..3686816(-) (pilG) [Acinetobacter sp. XH1741]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1006782 ABLB96_RS17695 WP_000389061.1 3686433..3686816(-) (pilG) [Acinetobacter sp. XH1741]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGTGAAGGTTGTGAGGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATAGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAAAACTCTCAAAATTATCAA
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCATTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment