Detailed information NTG1006745

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: ABLB96_RS00965
• Genome accession: NZ_CP157428
• Coordinates: 178077..178553 (-)
• Length: 158 a.a.
• NCBI ID: WP_348895777.1
• Uniprot ID: A0AB39K5N6
• Organism: Acinetobacter sp. XH1741
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 173077..183553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB96_RS00930 (ABLB96_00930)	-	173118..174152 (+)	1035	WP_348895772.1	lipase secretion chaperone	-
ABLB96_RS00935 (ABLB96_00935)	-	174268..175209 (+)	942	WP_348895865.1	triacylglycerol lipase	-
ABLB96_RS00940 (ABLB96_00940)	rplS	175262..175630 (-)	369	WP_348895773.1	50S ribosomal protein L19	-
ABLB96_RS00945 (ABLB96_00945)	trmD	175850..176605 (-)	756	WP_348895774.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ABLB96_RS00950 (ABLB96_00950)	rimM	176652..177200 (-)	549	WP_348895775.1	ribosome maturation factor RimM	-
ABLB96_RS00955 (ABLB96_00955)	rpsP	177220..177471 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ABLB96_RS00960 (ABLB96_00960)	-	177619..178083 (-)	465	WP_348895776.1	type IV pilin protein	-
ABLB96_RS00965 (ABLB96_00965)	comE	178077..178553 (-)	477	WP_348895777.1	type IV pilin protein	Machinery gene
ABLB96_RS00970 (ABLB96_00970)	-	178567..182241 (-)	3675	WP_348895779.1	PilC/PilY family type IV pilus protein	-
ABLB96_RS00975 (ABLB96_00975)	-	182257..183039 (-)	783	WP_348895780.1	pilus assembly PilX N-terminal domain-containing protein	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 17226.75 Da
• Isoelectric Point: 10.1270

>NTDB_id=1006745 ABLB96_RS00965 WP_348895777.1 178077..178553(-) (comE) [Acinetobacter sp. XH1741]
MKRKFTYSLGFTLIELMVVVAIVAIFAAVAIPSYQAYVLRADASRAQQQMQQIAVQLARQKSRNFNYKGFSTGSTAPVNL
PVGAPGSAIKYRITVRDGDDTTKPLTDPTVLGQNWVIRAEASDPNNFTYLLGSNGLRCKNKATSNVTYITCGTGAEPW

Nucleotide

• Length: 477 bp

>NTDB_id=1006745 ABLB96_RS00965 WP_348895777.1 178077..178553(-) (comE) [Acinetobacter sp. XH1741]
ATGAAACGTAAATTCACGTATTCTTTAGGCTTTACTCTTATTGAGCTAATGGTTGTGGTTGCGATTGTTGCTATTTTTGC
TGCAGTTGCAATCCCTTCATATCAGGCCTATGTTCTACGAGCTGATGCTTCACGTGCACAACAGCAAATGCAACAAATCG
CAGTGCAACTCGCACGTCAGAAATCTAGAAATTTTAATTACAAAGGTTTCTCTACCGGGTCTACAGCCCCAGTAAATTTG
CCTGTCGGAGCACCGGGTAGTGCTATTAAATACCGAATAACGGTACGGGATGGTGACGATACAACGAAACCCTTAACAGA
TCCTACAGTTTTAGGGCAAAACTGGGTTATCAGGGCAGAGGCTTCCGATCCTAATAATTTTACTTATTTGTTGGGTAGTA
ATGGATTACGTTGCAAGAATAAAGCCACTAGCAATGTTACTTATATCACTTGTGGCACTGGAGCTGAGCCTTGGTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (32-101)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	46.061	100	0.481
pilY2	Acinetobacter baumannii D1279779	43.75	100	0.443