Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | FGL23_RS06955 | Genome accession | NZ_LR594049 |
| Coordinates | 1451742..1452398 (-) | Length | 218 a.a. |
| NCBI ID | WP_008809355.1 | Uniprot ID | A8AY37 |
| Organism | Streptococcus gordonii strain NCTC10231 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1446742..1457398
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL23_RS06950 (NCTC10231_01387) | - | 1450384..1451745 (-) | 1362 | WP_061603776.1 | sensor histidine kinase | - |
| FGL23_RS06955 (NCTC10231_01388) | scnR | 1451742..1452398 (-) | 657 | WP_008809355.1 | response regulator transcription factor | Regulator |
| FGL23_RS06960 (NCTC10231_01389) | - | 1452417..1453634 (-) | 1218 | WP_008809356.1 | ABC transporter permease | - |
| FGL23_RS06965 (NCTC10231_01390) | - | 1453642..1454322 (-) | 681 | WP_008809357.1 | ABC transporter ATP-binding protein | - |
| FGL23_RS06970 (NCTC10231_01391) | - | 1454309..1455562 (-) | 1254 | WP_060553362.1 | efflux RND transporter periplasmic adaptor subunit | - |
| FGL23_RS06975 (NCTC10231_01392) | - | 1455593..1455856 (-) | 264 | WP_008809359.1 | hypothetical protein | - |
| FGL23_RS06980 (NCTC10231_01393) | - | 1456132..1457142 (+) | 1011 | WP_060553361.1 | lactonase family protein | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 24915.92 Da Isoelectric Point: 4.7477
>NTDB_id=1006090 FGL23_RS06955 WP_008809355.1 1451742..1452398(-) (scnR) [Streptococcus gordonii strain NCTC10231]
MYKILVVEDDTTINQVICEFLKESNYSVTPVYDGAEALRQFEEETFDLVILDMMLPSVSGLDVLKEIRKTSQIPVMILTA
LDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRTAVYSEIVIGDLRVVLEDCTIFWQGEKLALTKKEYEILEVLA
KRKGHLVTRDQLMNTIWGYSELDSRVLDNHIKNIRKKVPGIPLSTITGMGYQLGGDQA
MYKILVVEDDTTINQVICEFLKESNYSVTPVYDGAEALRQFEEETFDLVILDMMLPSVSGLDVLKEIRKTSQIPVMILTA
LDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRTAVYSEIVIGDLRVVLEDCTIFWQGEKLALTKKEYEILEVLA
KRKGHLVTRDQLMNTIWGYSELDSRVLDNHIKNIRKKVPGIPLSTITGMGYQLGGDQA
Nucleotide
Download Length: 657 bp
>NTDB_id=1006090 FGL23_RS06955 WP_008809355.1 1451742..1452398(-) (scnR) [Streptococcus gordonii strain NCTC10231]
ATGTATAAGATTTTGGTCGTAGAAGATGATACTACTATCAACCAAGTCATATGTGAATTTTTAAAAGAAAGTAACTACAG
TGTTACGCCGGTTTATGATGGCGCAGAGGCTCTACGTCAGTTTGAAGAAGAGACTTTTGATTTAGTCATTTTAGATATGA
TGTTGCCATCCGTTAGTGGCTTAGATGTACTCAAGGAAATCCGTAAGACATCACAGATTCCAGTCATGATTTTAACTGCT
CTAGATGATGAATATACCCAACTAGTGAGTTTCAACCACCTGATTAGTGATTATGTGACTAAGCCTTTTTCACCTCTCAT
TTTGGTGAAAAGAATAGAAAATATTTTACGTCGGACTGCTGTTTATTCTGAAATTGTCATCGGTGACTTGCGCGTGGTTT
TAGAAGATTGTACGATTTTCTGGCAAGGAGAAAAGCTAGCTCTGACCAAGAAGGAGTATGAAATTCTAGAAGTTCTTGCT
AAACGTAAGGGCCATTTAGTGACAAGAGACCAGCTTATGAATACTATTTGGGGCTATAGTGAGCTAGATAGTCGTGTCTT
GGACAATCATATTAAGAATATTCGCAAGAAAGTTCCTGGAATTCCTTTGTCAACCATTACTGGTATGGGCTATCAATTGG
GTGGGGATCAGGCGTGA
ATGTATAAGATTTTGGTCGTAGAAGATGATACTACTATCAACCAAGTCATATGTGAATTTTTAAAAGAAAGTAACTACAG
TGTTACGCCGGTTTATGATGGCGCAGAGGCTCTACGTCAGTTTGAAGAAGAGACTTTTGATTTAGTCATTTTAGATATGA
TGTTGCCATCCGTTAGTGGCTTAGATGTACTCAAGGAAATCCGTAAGACATCACAGATTCCAGTCATGATTTTAACTGCT
CTAGATGATGAATATACCCAACTAGTGAGTTTCAACCACCTGATTAGTGATTATGTGACTAAGCCTTTTTCACCTCTCAT
TTTGGTGAAAAGAATAGAAAATATTTTACGTCGGACTGCTGTTTATTCTGAAATTGTCATCGGTGACTTGCGCGTGGTTT
TAGAAGATTGTACGATTTTCTGGCAAGGAGAAAAGCTAGCTCTGACCAAGAAGGAGTATGAAATTCTAGAAGTTCTTGCT
AAACGTAAGGGCCATTTAGTGACAAGAGACCAGCTTATGAATACTATTTGGGGCTATAGTGAGCTAGATAGTCGTGTCTT
GGACAATCATATTAAGAATATTCGCAAGAAAGTTCCTGGAATTCCTTTGTCAACCATTACTGGTATGGGCTATCAATTGG
GTGGGGATCAGGCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
38.938 |
100 |
0.404 |
| micA | Streptococcus pneumoniae Cp1015 |
37.391 |
100 |
0.394 |
| vicR | Streptococcus mutans UA159 |
36.797 |
100 |
0.39 |