Detailed information NTG1004098

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABH595_RS13890
• Genome accession: NZ_CP157084
• Coordinates: 2649172..2649789 (-)
• Length: 205 a.a.
• NCBI ID: WP_004398514.1
• Uniprot ID: A0AAE2SLR2
• Organism: Bacillus subtilis subsp. subtilis isolate FELIX_MS9
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2644172..2654789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH595_RS13860 (ABH595_13860)	rpsT	2644474..2644740 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
ABH595_RS13865 (ABH595_13865)	holA	2644755..2645798 (-)	1044	WP_003229987.1	DNA polymerase III subunit delta	-
ABH595_RS13870 (ABH595_13870)	-	2645838..2645987 (-)	150	WP_003229985.1	hypothetical protein	-
ABH595_RS13875 (ABH595_13875)	yqzM	2646028..2646162 (+)	135	WP_003229983.1	YqzM family protein	-
ABH595_RS13880 (ABH595_13880)	comEC	2646202..2648532 (-)	2331	WP_009967776.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABH595_RS13885 (ABH595_13885)	comEB	2648536..2649105 (-)	570	WP_003229978.1	ComE operon protein 2	-
ABH595_RS13890 (ABH595_13890)	comEA	2649172..2649789 (-)	618	WP_004398514.1	competence protein ComEA	Machinery gene
ABH595_RS13895 (ABH595_13895)	comER	2649873..2650694 (+)	822	WP_004398597.1	late competence protein ComER	-
ABH595_RS13900 (ABH595_13900)	yqeM	2650760..2651503 (-)	744	WP_003229973.1	class I SAM-dependent methyltransferase	-
ABH595_RS13905 (ABH595_13905)	rsfS	2651500..2651856 (-)	357	WP_003229971.1	ribosome silencing factor	-
ABH595_RS13910 (ABH595_13910)	yqeK	2651874..2652434 (-)	561	WP_004399059.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ABH595_RS13915 (ABH595_13915)	nadD	2652424..2652993 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
ABH595_RS13920 (ABH595_13920)	yhbY	2653005..2653295 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
ABH595_RS13925 (ABH595_13925)	aroE	2653289..2654131 (-)	843	WP_003229967.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21769.45 Da
• Isoelectric Point: 4.7220

>NTDB_id=1004098 ABH595_RS13890 WP_004398514.1 2649172..2649789(-) (comEA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS9]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1004098 ABH595_RS13890 WP_004398514.1 2649172..2649789(-) (comEA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS9]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAACGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTGGCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAGGAAAACGGTCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (142-203)

• SLBB domain (SLBB) (63-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
comEA	Staphylococcus aureus MW2	37.273	100	0.4
comEA	Staphylococcus aureus N315	36.364	100	0.39