Detailed information NTG1003897

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABGT20_RS13110
• Genome accession: NZ_CP157038
• Coordinates: 2434488..2435105 (-)
• Length: 205 a.a.
• NCBI ID: WP_014480312.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain AR01-03
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2429488..2440105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGT20_RS13080 (ABGT20_13080)	rpsT	2429790..2430056 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
ABGT20_RS13085 (ABGT20_13085)	holA	2430071..2431114 (-)	1044	WP_014480310.1	DNA polymerase III subunit delta	-
ABGT20_RS13090 (ABGT20_13090)	-	2431154..2431303 (-)	150	WP_003229985.1	hypothetical protein	-
ABGT20_RS13095 (ABGT20_13095)	yqzM	2431344..2431478 (+)	135	WP_003229983.1	YqzM family protein	-
ABGT20_RS13100 (ABGT20_13100)	comEC	2431518..2433848 (-)	2331	WP_033881047.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABGT20_RS13105 (ABGT20_13105)	comEB	2433852..2434421 (-)	570	WP_003229978.1	ComE operon protein 2	-
ABGT20_RS13110 (ABGT20_13110)	comEA	2434488..2435105 (-)	618	WP_014480312.1	competence protein ComEA	Machinery gene
ABGT20_RS13115 (ABGT20_13115)	comER	2435189..2436010 (+)	822	WP_014480313.1	late competence protein ComER	-
ABGT20_RS13120 (ABGT20_13120)	yqeM	2436076..2436819 (-)	744	WP_014480314.1	class I SAM-dependent methyltransferase	-
ABGT20_RS13125 (ABGT20_13125)	rsfS	2436816..2437172 (-)	357	WP_014480315.1	ribosome silencing factor	-
ABGT20_RS13130 (ABGT20_13130)	yqeK	2437190..2437750 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ABGT20_RS13135 (ABGT20_13135)	nadD	2437740..2438309 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
ABGT20_RS13140 (ABGT20_13140)	yhbY	2438321..2438611 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
ABGT20_RS13145 (ABGT20_13145)	aroE	2438605..2439447 (-)	843	WP_014480317.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21781.51 Da
• Isoelectric Point: 4.7220

>NTDB_id=1003897 ABGT20_RS13110 WP_014480312.1 2434488..2435105(-) (comEA) [Bacillus subtilis strain AR01-03]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEEIAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1003897 ABGT20_RS13110 WP_014480312.1 2434488..2435105(-) (comEA) [Bacillus subtilis strain AR01-03]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAACGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAATAGCAGTGCAGCAAGGTGGCGGAGGGTCAG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAAGAAAACGGGCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (142-203)

• SLBB domain (SLBB) (63-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	99.512	100	0.995
comEA	Staphylococcus aureus MW2	37.273	100	0.4
comEA	Staphylococcus aureus N315	36.364	100	0.39