Detailed information NTG1003775

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: E0F32_RS09595
• Genome accession: NZ_LR216050
• Coordinates: 1777744..1778643 (-)
• Length: 299 a.a.
• NCBI ID: WP_024477664.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1772744..1783643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F32_RS09570 (SAMEA3431333_01797)	rsmA	1772969..1773841 (-)	873	WP_001216852.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
E0F32_RS09575 (SAMEA3431333_01798)	-	1774092..1774385 (-)	294	WP_000333255.1	hypothetical protein	-
E0F32_RS09580 (SAMEA3431333_01799)	-	1774378..1775019 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
E0F32_RS09585 (SAMEA3431333_01800)	-	1775021..1777051 (-)	2031	WP_024477663.1	bacteriocin-associated integral membrane family protein	-
E0F32_RS09590 (SAMEA3431333_01801)	-	1777128..1777424 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
E0F32_RS09595 (SAMEA3431333_01802)	comR	1777744..1778643 (-)	900	WP_024477664.1	helix-turn-helix transcriptional regulator	Regulator
E0F32_RS09600 (SAMEA3431333_01803)	rnmV	1778715..1779275 (-)	561	WP_024477665.1	ribonuclease M5	-
E0F32_RS09605 (SAMEA3431333_01804)	-	1779275..1780048 (-)	774	WP_024477666.1	TatD family hydrolase	-
E0F32_RS09615 (SAMEA3431333_01805)	-	1780353..1781072 (-)	720	Protein_1819	DUF1542 domain-containing protein	-
E0F32_RS09620 (SAMEA3431333_01806)	rpmH	1781281..1781415 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
E0F32_RS09625 (SAMEA3431333_01807)	-	1781560..1782774 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
E0F32_RS09630 (SAMEA3431333_01808)	-	1782930..1783223 (-)	294	WP_000977366.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35337.14 Da
• Isoelectric Point: 4.9064

>NTDB_id=1003775 E0F32_RS09595 WP_024477664.1 1777744..1778643(-) (comR) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=1003775 E0F32_RS09595 WP_024477664.1 1777744..1778643(-) (comR) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368
comR	Streptococcus mutans UA159	37.415	98.328	0.368
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361