Detailed information NTG1003671

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: EL305_RS10500
• Genome accession: NZ_LR134528
• Coordinates: 1761913..1762497 (-)
• Length: 194 a.a.
• NCBI ID: WP_002226947.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain NCTC12163
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1756913..1767497

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL305_RS10465 (NCTC12163_01761)	-	1757190..1757489 (+)	300	WP_002226942.1	DUF2818 family protein	-
EL305_RS10470 (NCTC12163_01762)	-	1757598..1758494 (-)	897	WP_002226943.1	polyprenyl synthetase family protein	-
EL305_RS10475 (NCTC12163_01763)	-	1758478..1758702 (-)	225	WP_002236646.1	exodeoxyribonuclease VII small subunit	-
EL305_RS14600	-	1758763..1758939 (-)	177	WP_079267043.1	exodeoxyribonuclease VII	-
EL305_RS10485 (NCTC12163_01764)	rsgA	1758966..1759889 (-)	924	WP_002226945.1	ribosome small subunit-dependent GTPase A	-
EL305_RS10490 (NCTC12163_01765)	-	1759894..1761750 (-)	1857	WP_002235412.1	ABC transporter ATP-binding protein	-
EL305_RS10495 (NCTC12163_01766)	-	1761776..1761913 (-)	138	WP_002235413.1	hypothetical protein	-
EL305_RS10500 (NCTC12163_01767)	ruvA	1761913..1762497 (-)	585	WP_002226947.1	Holliday junction branch migration protein RuvA	Machinery gene
EL305_RS10505 (NCTC12163_01768)	-	1762579..1762905 (-)	327	WP_002235414.1	PepSY domain-containing protein	-
EL305_RS10510 (NCTC12163_01769)	-	1762959..1763678 (-)	720	WP_002236647.1	septal ring lytic transglycosylase RlpA family protein	-
EL305_RS10515	-	1763675..1763797 (-)	123	WP_009346050.1	hypothetical protein	-
EL305_RS10520 (NCTC12163_01770)	trmL	1763808..1764272 (-)	465	WP_002215661.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
EL305_RS10525 (NCTC12163_01771)	-	1764337..1765062 (-)	726	WP_019742794.1	ComF family protein	-
EL305_RS10530 (NCTC12163_01772)	bioH	1765061..1765804 (+)	744	WP_002231629.1	pimeloyl-ACP methyl ester esterase BioH	-
EL305_RS10535 (NCTC12163_01773)	-	1765806..1766594 (+)	789	WP_002234506.1	hypothetical protein	-
EL305_RS14145 (NCTC12163_01774)	-	1766670..1767296 (+)	627	WP_228372587.1	hypothetical protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20689.87 Da
• Isoelectric Point: 5.1063

>NTDB_id=1003671 EL305_RS10500 WP_002226947.1 1761913..1762497(-) (ruvA) [Neisseria meningitidis strain NCTC12163]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVSG
IGAKTALGILSAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=1003671 EL305_RS10500 WP_002226947.1 1761913..1762497(-) (ruvA) [Neisseria meningitidis strain NCTC12163]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAGCGCAAAACATTCCGCCAACTGATCAAGGTCAGCGGC
ATCGGGGCAAAAACCGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCAGGCGGTTGCAGAAGAAGATGT
CAAACGCCTGTCTTCCGCGCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGGAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-62)

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA, C-terminal domain (RuvA_C) (150-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	38.5	100	0.397
ruvA	Streptococcus pneumoniae D39	38.5	100	0.397
ruvA	Streptococcus pneumoniae TIGR4	38	100	0.392
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.922	100	0.381