Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ABGT21_RS19935 Genome accession   NZ_CP156990
Coordinates   3712850..3712969 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain AR02-06     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3707850..3717969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGT21_RS19910 (ABGT21_19905) albG 3708014..3708715 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ABGT21_RS19915 (ABGT21_19910) ywhL 3708721..3710097 (-) 1377 WP_014481223.1 YncE family protein -
  ABGT21_RS19920 (ABGT21_19915) ywhK 3710136..3711491 (-) 1356 WP_014481224.1 YncE family protein -
  ABGT21_RS19925 (ABGT21_19920) - 3711488..3711718 (-) 231 Protein_3866 hypothetical protein -
  ABGT21_RS19930 (ABGT21_19925) rapF 3711721..3712866 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  ABGT21_RS19935 (ABGT21_19930) phrF 3712850..3712969 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ABGT21_RS19940 (ABGT21_19935) - 3713067..3713494 (+) 428 Protein_3869 YbaK/EbsC family protein -
  ABGT21_RS19945 (ABGT21_19940) speB 3713559..3714431 (-) 873 WP_003227545.1 agmatinase -
  ABGT21_RS19950 (ABGT21_19945) speE 3714492..3715322 (-) 831 WP_003227543.1 spermidine synthase -
  ABGT21_RS19955 (ABGT21_19950) pbpG 3715524..3717599 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1003666 ABGT21_RS19935 WP_009968329.1 3712850..3712969(+) (phrF) [Bacillus subtilis strain AR02-06]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1003666 ABGT21_RS19935 WP_009968329.1 3712850..3712969(+) (phrF) [Bacillus subtilis strain AR02-06]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment