Detailed information NTG1003541

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: EL297_RS12670
• Genome accession: NZ_LR134525
• Coordinates: 2140328..2140912 (-)
• Length: 194 a.a.
• NCBI ID: WP_082308673.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain NCTC10025
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2135328..2145912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL297_RS12635 (NCTC10025_02134)	-	2135605..2135904 (+)	300	WP_002226942.1	DUF2818 family protein	-
EL297_RS12640 (NCTC10025_02135)	-	2136013..2136909 (-)	897	WP_002245834.1	polyprenyl synthetase family protein	-
EL297_RS12645 (NCTC10025_02136)	-	2136893..2137117 (-)	225	WP_002236646.1	exodeoxyribonuclease VII small subunit	-
EL297_RS14175	-	2137178..2137354 (-)	177	WP_079267043.1	exodeoxyribonuclease VII	-
EL297_RS12655 (NCTC10025_02137)	rsgA	2137381..2138304 (-)	924	WP_002226945.1	ribosome small subunit-dependent GTPase A	-
EL297_RS12660 (NCTC10025_02138)	-	2138309..2140165 (-)	1857	WP_002245835.1	ABC transporter ATP-binding protein	-
EL297_RS12665 (NCTC10025_02139)	-	2140191..2140328 (-)	138	WP_002240237.1	hypothetical protein	-
EL297_RS12670 (NCTC10025_02140)	ruvA	2140328..2140912 (-)	585	WP_082308673.1	Holliday junction branch migration protein RuvA	Machinery gene
EL297_RS12675 (NCTC10025_02141)	-	2140994..2141320 (-)	327	WP_002218661.1	PepSY domain-containing protein	-
EL297_RS12680 (NCTC10025_02142)	-	2141374..2142093 (-)	720	WP_002245836.1	septal ring lytic transglycosylase RlpA family protein	-
EL297_RS12690 (NCTC10025_02143)	trmL	2142221..2142685 (-)	465	WP_002215661.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
EL297_RS12695 (NCTC10025_02144)	-	2142750..2143475 (-)	726	WP_002228923.1	ComF family protein	-
EL297_RS13820	bioH	2143474..2144214 (+)	741	Protein_2109	pimeloyl-ACP methyl ester esterase BioH	-
EL297_RS13825 (NCTC10025_02145)	-	2144219..2145007 (+)	789	WP_002245837.1	class I SAM-dependent methyltransferase	-
EL297_RS13830 (NCTC10025_02146)	-	2145083..2145709 (+)	627	WP_232012969.1	hypothetical protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20629.82 Da
• Isoelectric Point: 5.1063

>NTDB_id=1003541 EL297_RS12670 WP_082308673.1 2140328..2140912(-) (ruvA) [Neisseria meningitidis strain NCTC10025]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVTHAVTDGLFAAAPAADETEDIVGTLLA
LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=1003541 EL297_RS12670 WP_082308673.1 2140328..2140912(-) (ruvA) [Neisseria meningitidis strain NCTC10025]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAAACATTCCGCCAACTGATCAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCAGGCGGTTGCAGAAGAAGATGT
CAAACGCCTCTCCTCCGCCCCGGGAATCGGCAAAAAAACCGCCGAACGCATGGTTTTGGAACTGCGCGGCAAGCTGGTCA
CGCATGCGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCGGCACGCTGCTTGCG
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGGAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

• RuvA, C-terminal domain (RuvA_C) (150-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	38	100	0.392
ruvA	Streptococcus pneumoniae D39	38	100	0.392
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.922	100	0.381