Detailed information NTG1003290

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABG803_RS23495
• Genome accession: NZ_CP156930
• Coordinates: 5052907..5054244 (+)
• Length: 445 a.a.
• NCBI ID: WP_034032774.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain 2024CK-00356
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5047907..5059244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABG803_RS23470 (ABG803_23475)	pgeF	5048050..5048778 (-)	729	WP_003116257.1	peptidoglycan editing factor PgeF	-
ABG803_RS23475 (ABG803_23480)	rluD	5048775..5049737 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ABG803_RS23480 (ABG803_23485)	-	5049883..5050908 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ABG803_RS23485 (ABG803_23490)	-	5051065..5051310 (+)	246	WP_003102591.1	PP0621 family protein	-
ABG803_RS23490 (ABG803_23495)	pilS	5051300..5052892 (+)	1593	WP_003094692.1	two-component system sensor histidine kinase PilS	Regulator
ABG803_RS23495 (ABG803_23500)	pilR	5052907..5054244 (+)	1338	WP_034032774.1	two-component system response regulator PilR	Regulator
ABG803_RS23500 (ABG803_23505)	thiO	5054290..5055387 (-)	1098	WP_347914558.1	glycine oxidase ThiO	-
ABG803_RS23505 (ABG803_23510)	-	5055527..5056027 (+)	501	WP_003116259.1	GspH/FimT family pseudopilin	-
ABG803_RS23510 (ABG803_23515)	-	5056150..5056638 (+)	489	WP_003141552.1	GspH/FimT family pseudopilin	-
ABG803_RS23515 (ABG803_23520)	pilV	5056648..5057172 (+)	525	WP_003116261.1	type IV pilus modification protein PilV	Machinery gene
ABG803_RS23520 (ABG803_23525)	-	5057181..5057996 (+)	816	WP_003116262.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ABG803_RS23525 (ABG803_23530)	-	5057993..5058598 (+)	606	WP_003116263.1	pilus assembly protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49753.06 Da
• Isoelectric Point: 5.8638

>NTDB_id=1003290 ABG803_RS23495 WP_034032774.1 5052907..5054244(+) (pilR) [Pseudomonas aeruginosa strain 2024CK-00356]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSSKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLADRI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1003290 ABG803_RS23495 WP_034032774.1 5052907..5054244(+) (pilR) [Pseudomonas aeruginosa strain 2024CK-00356]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGTAGCAGCAAGGAGCTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCGCCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGATCGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTATACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCGGCGAGCCTGAGCGAAATCGACAACCTCGAGGAC
TACCTGGAAGATATCGAGCGCAAGCTGATCATGCAGGCGCTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	99.551	100	0.996
pilR	Acinetobacter baumannii strain A118	50.98	100	0.526
luxO	Vibrio cholerae strain A1552	37.946	100	0.382