Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AACH30_RS09195 Genome accession   NZ_AP027243
Coordinates   1868934..1870181 (-) Length   415 a.a.
NCBI ID   WP_014025467.1    Uniprot ID   A0AA43PEA3
Organism   Lactococcus garvieae strain L21-68     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1863934..1875181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH30_RS09185 - 1865523..1866344 (-) 822 Protein_1779 PolC-type DNA polymerase III N-terminal domain-containing protein -
  AACH30_RS09190 (LG21E68_18020) - 1867057..1868907 (-) 1851 WP_003133504.1 proline--tRNA ligase -
  AACH30_RS09195 (LG21E68_18030) eeP 1868934..1870181 (-) 1248 WP_014025467.1 RIP metalloprotease RseP Regulator
  AACH30_RS09200 (LG21E68_18040) - 1870357..1871151 (-) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  AACH30_RS09205 (LG21E68_18050) - 1871148..1871885 (-) 738 WP_003133511.1 isoprenyl transferase -
  AACH30_RS09210 (LG21E68_18060) yajC 1872086..1872421 (-) 336 WP_014025468.1 preprotein translocase subunit YajC -
  AACH30_RS09215 (LG21E68_18070) - 1872496..1873143 (-) 648 WP_074751891.1 DNA alkylation repair protein -
  AACH30_RS09220 (LG21E68_18080) rlmH 1873140..1873619 (-) 480 WP_003133515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AACH30_RS09225 (LG21E68_18090) htrA 1873923..1875140 (+) 1218 WP_003133516.1 trypsin-like peptidase domain-containing protein Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45097.57 Da        Isoelectric Point: 5.8048

>NTDB_id=100326 AACH30_RS09195 WP_014025467.1 1868934..1870181(-) (eeP) [Lactococcus garvieae strain L21-68]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=100326 AACH30_RS09195 WP_014025467.1 1868934..1870181(-) (eeP) [Lactococcus garvieae strain L21-68]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGGCCCAAGATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGGACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGGGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATTGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGCCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTGCAATCGGGTACCCCTGCTT
ATTCGGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACTGGCAACTGGCAAGAAGTTGTCCAA
CGGATTAGTGCAAATGACGGCAGTGAAATCAAGCTGGATATTGAACGGGATGGCGCATCAAAGACACTAGAGCTCAAACC
AGAAAAAATTGACGGAAGATATCGCATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGCCTTGATAAACTT
GGTGGACCCGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGCCTATTATCCATCATCGCTTTACTTGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGGAAAATCGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566


Multiple sequence alignment