Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABEF88_RS12620 Genome accession   NZ_CP156804
Coordinates   2480453..2480836 (-) Length   127 a.a.
NCBI ID   WP_034583327.1    Uniprot ID   -
Organism   Acinetobacter thermotolerans strain ANC 7881     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2475453..2485836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEF88_RS12605 (ABEF88_12605) - 2477393..2479465 (-) 2073 WP_347453015.1 methyl-accepting chemotaxis protein -
  ABEF88_RS12610 (ABEF88_12610) - 2479511..2480047 (-) 537 WP_034583323.1 chemotaxis protein CheW -
  ABEF88_RS12615 (ABEF88_12615) - 2480054..2480422 (-) 369 WP_034583325.1 response regulator -
  ABEF88_RS12620 (ABEF88_12620) pilG 2480453..2480836 (-) 384 WP_034583327.1 twitching motility response regulator PilG Regulator
  ABEF88_RS12625 (ABEF88_12625) - 2481156..2481812 (+) 657 WP_034583329.1 hypothetical protein -
  ABEF88_RS12630 (ABEF88_12630) - 2481864..2482997 (+) 1134 WP_347453016.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.30 Da        Isoelectric Point: 4.7172

>NTDB_id=1002980 ABEF88_RS12620 WP_034583327.1 2480453..2480836(-) (pilG) [Acinetobacter thermotolerans strain ANC 7881]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1002980 ABEF88_RS12620 WP_034583327.1 2480453..2480836(-) (pilG) [Acinetobacter thermotolerans strain ANC 7881]
ATGGACGATAAATTCCAAAATCTAAAAGTTATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCGGAAACTCTTCT
TCAGCGTGAGGGGTGTGAAGTCGTTACTGCAGTGGATGGCTTTGAAGCACTGTCCAAAATTGCAGAGGCAAATCCCGATA
TCGTTTTTGTAGACATCATGATGCCGCGCCTAGACGGTTACCAGACTTGTGCCTTGATTAAAAACTCGCAAAACTACCAG
AACATTCCTGTTATTATGCTATCAAGTAAAGATGGTTTGTTCGACCAGGCTAAAGGCCGTGTAGTAGGTTCAGATGAGTA
TCTTACTAAGCCATTCAGCAAAGATGAGTTGCTGAACGCAATCCGCAACCACATCAGCGCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment