Detailed information NTG1002974

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF88_RS08635
• Genome accession: NZ_CP156804
• Coordinates: 1722588..1723793 (-)
• Length: 401 a.a.
• NCBI ID: WP_347454159.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7881
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1717588..1728793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF88_RS08615 (ABEF88_08615)	-	1719023..1719472 (+)	450	WP_347452718.1	MaoC family dehydratase	-
ABEF88_RS08620 (ABEF88_08620)	-	1719624..1720652 (+)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF88_RS08625 (ABEF88_08625)	gcvH	1720725..1721099 (+)	375	WP_347452719.1	glycine cleavage system protein GcvH	-
ABEF88_RS08630 (ABEF88_08630)	-	1721335..1722528 (+)	1194	WP_347452720.1	MFS transporter	-
ABEF88_RS08635 (ABEF88_08635)	pilU	1722588..1723793 (-)	1206	WP_347454159.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF88_RS08640 (ABEF88_08640)	pilU	1724099..1725277 (-)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF88_RS08645 (ABEF88_08645)	-	1725490..1726539 (-)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF88_RS08650 (ABEF88_08650)	-	1727312..1728421 (-)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 45386.74 Da
• Isoelectric Point: 6.2782

>NTDB_id=1002974 ABEF88_RS08635 WP_347454159.1 1722588..1723793(-) (pilU) [Acinetobacter thermotolerans strain ANC 7881]
MFTAELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQNLTADKTKLFAYALMNEKQRQEYETELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGQGRRAAVEIMLNTPLISDLILKGDFHELKAIMAKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELRLQIKLKSSRTNPELNNNPTSFSMVEEKKPEDEVDGESKTEEQT
S

Nucleotide

• Length: 1206 bp

>NTDB_id=1002974 ABEF88_RS08635 WP_347454159.1 1722588..1723793(-) (pilU) [Acinetobacter thermotolerans strain ANC 7881]
ATGTTCACGGCAGAGTTATTAGAAGAAGCACGTAAATTTATGCACCATATGCTCACCAAAGTGGTGGAATATGGTGGTTC
GGATTTATTTATTACTGCCGACTTTCCACCGAGTATCAAACATCAGGGGCTGATGAAACCTTTTGGTCAGCAAAACCTAA
CTGCAGATAAAACCAAGCTGTTTGCTTATGCGTTGATGAATGAAAAACAGCGTCAGGAATACGAAACTGAGCTGGAATGT
AACTTTGCCATTACCGTGCCGGGTGTTTCCCGTTTCCGTGTCAATGTTTTTCAGCAACAGCTCAATGTAGGAATGGTGAT
CCGTACCATTACTGCAGAAATTCCGAACTTCCAGAAACTGAAATTACCTGAATCACTCAAACATGTGATTATGGAAAAAC
GCGGGCTAGTATTGGTTGTTGGGGGGACTGGGTCTGGTAAATCGACCTCACTGGCAGCGATGATTGATTACCGGAATGAA
AATTCCGCCGGACATATCATTACCGTAGAAGATCCGGTGGAATATGTGCATAAGCATAAAAAGTCCATGATCACCCACCG
TGAAGTCGGTGTAGACAGTCACTCCTGGCACAATGCGCTAAAAAATACCCTACGTCAGGCGCCGGATGTGATTCTGATTG
GCGAGATCCGTGATACCGAAACCATGGAACACGCGATTGCCTTTGCCGAAACTGGACACTTATGTCTAGGAACACTACAT
GCCAACAACGCCAACCAGACTTTGGATCGGATTATTAACTTCTTCCCGGAAGAGCGCCGTAATCAGTTGTTGATGGATCT
GTCTTCCAATATGAAAGCCATTATTTCCCAGCGTCTAATTCGTACTCAAGATGGTCAAGGCCGTCGTGCAGCAGTGGAGA
TCATGTTAAATACGCCGCTGATTTCTGACCTGATTTTAAAAGGCGATTTCCATGAGTTGAAAGCAATTATGGCCAAATCC
CGTGAACTCGGTATGCAGACTTTCGATCAGGCACTGTTCGACTTGTACAACGAAGGGGCGATTTCTTATGAAGAGGCACT
ACGTAATGCAGATTCAACTAATGAATTGCGTTTACAAATTAAACTAAAAAGTAGTCGAACCAATCCTGAGTTGAATAATA
ATCCTACTTCATTCAGTATGGTTGAAGAGAAAAAGCCGGAAGATGAAGTTGATGGCGAAAGCAAGACTGAAGAACAGACT
TCTTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (116-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	60.057	86.783	0.521
pilU	Acinetobacter baylyi ADP1	56.145	89.277	0.501
pilU	Vibrio cholerae strain A1552	52.394	88.529	0.464