Detailed information NTG1002715

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF86_RS07115
• Genome accession: NZ_CP156780
• Coordinates: 1443392..1444597 (+)
• Length: 401 a.a.
• NCBI ID: WP_347473491.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7933
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1438392..1449597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF86_RS07100 (ABEF86_07100)	-	1438764..1439873 (+)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABEF86_RS07105 (ABEF86_07105)	-	1440646..1441695 (+)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF86_RS07110 (ABEF86_07110)	pilU	1441908..1443086 (+)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF86_RS07115 (ABEF86_07115)	pilU	1443392..1444597 (+)	1206	WP_347473491.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF86_RS07120 (ABEF86_07120)	-	1444648..1445841 (-)	1194	WP_034588273.1	MFS transporter	-
ABEF86_RS07125 (ABEF86_07125)	gcvH	1446078..1446452 (-)	375	WP_034588271.1	glycine cleavage system protein GcvH	-
ABEF86_RS07130 (ABEF86_07130)	-	1446525..1447553 (-)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF86_RS07135 (ABEF86_07135)	-	1447705..1448154 (-)	450	WP_034588266.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 45318.62 Da
• Isoelectric Point: 6.2782

>NTDB_id=1002715 ABEF86_RS07115 WP_347473491.1 1443392..1444597(+) (pilU) [Acinetobacter thermotolerans strain ANC 7933]
MFTAELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQNLTADKTKLFAYALMNEKQRQEYETELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGQGRRAAVEIMLNTPLISDLILKGDFHELKAIMAKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELRLQIKLKSSRANPELNNNSTSFSMVEEKKPEDEADGESKTEEQT
S

Nucleotide

• Length: 1206 bp

>NTDB_id=1002715 ABEF86_RS07115 WP_347473491.1 1443392..1444597(+) (pilU) [Acinetobacter thermotolerans strain ANC 7933]
ATGTTCACGGCAGAGTTATTAGAAGAAGCACGTAAATTTATGCACCATATGCTCACCAAAGTGGTGGAATATGGTGGTTC
GGATTTATTTATTACTGCCGACTTTCCACCGAGTATCAAACATCAGGGGCTGATGAAACCTTTTGGTCAGCAAAACCTAA
CTGCAGATAAAACCAAGCTGTTTGCTTATGCGTTGATGAATGAAAAACAGCGTCAGGAATACGAAACTGAGCTGGAATGT
AACTTTGCCATTACCGTGCCGGGTGTTTCCCGTTTCCGTGTCAATGTTTTTCAGCAACAGCTCAATGTAGGAATGGTGAT
CCGTACCATTACTGCAGAAATTCCGAACTTCCAGAAACTGAAATTACCTGAATCACTCAAACATGTGATTATGGAAAAAC
GCGGGCTAGTATTGGTTGTTGGGGGGACTGGGTCTGGTAAATCGACCTCACTGGCAGCGATGATTGATTACCGGAATGAA
AATTCCGCCGGACATATCATTACCGTAGAAGATCCGGTGGAATATGTGCATAAGCATAAAAAGTCCATGATCACCCACCG
TGAAGTCGGTGTAGACAGTCACTCCTGGCACAATGCGCTAAAAAATACCCTACGTCAGGCGCCGGATGTGATTCTGATTG
GCGAGATCCGTGATACCGAAACCATGGAACACGCGATTGCCTTTGCCGAAACTGGACACTTATGTCTAGGAACACTACAT
GCCAACAACGCCAACCAGACTTTGGATCGGATTATTAACTTCTTCCCGGAAGAGCGCCGTAATCAGTTGTTGATGGATCT
GTCTTCCAATATGAAAGCCATTATTTCCCAGCGTCTAATTCGTACTCAAGATGGTCAAGGCCGTCGTGCAGCAGTGGAGA
TCATGTTAAATACGCCGCTGATTTCTGACCTGATTTTAAAAGGCGATTTCCATGAGTTGAAAGCAATTATGGCCAAATCC
CGTGAACTCGGTATGCAGACTTTCGATCAGGCACTGTTCGACTTGTACAACGAAGGGGCGATTTCTTATGAAGAGGCACT
ACGTAATGCAGATTCAACTAATGAATTGCGTTTACAAATTAAACTAAAAAGTAGTCGAGCTAATCCTGAGCTGAATAATA
ATTCTACTTCATTCAGTATGGTTGAAGAAAAAAAGCCGGAAGATGAAGCTGATGGCGAAAGCAAGACTGAAGAACAGACT
TCTTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (116-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.967	90.773	0.526
pilU	Acinetobacter baylyi ADP1	56.425	89.277	0.504
pilU	Vibrio cholerae strain A1552	52.394	88.529	0.464