Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABEF85_RS03610 Genome accession   NZ_CP156776
Coordinates   780078..780461 (+) Length   127 a.a.
NCBI ID   WP_034583327.1    Uniprot ID   -
Organism   Acinetobacter thermotolerans strain ANC 7955     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 775078..785461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEF85_RS03600 (ABEF85_03600) - 777917..779050 (-) 1134 WP_347453016.1 efflux RND transporter periplasmic adaptor subunit -
  ABEF85_RS03605 (ABEF85_03605) - 779102..779758 (-) 657 WP_034583329.1 hypothetical protein -
  ABEF85_RS03610 (ABEF85_03610) pilG 780078..780461 (+) 384 WP_034583327.1 twitching motility response regulator PilG Regulator
  ABEF85_RS03615 (ABEF85_03615) - 780492..780860 (+) 369 WP_034583325.1 response regulator -
  ABEF85_RS03620 (ABEF85_03620) - 780867..781403 (+) 537 WP_034583323.1 chemotaxis protein CheW -
  ABEF85_RS03625 (ABEF85_03625) - 781449..783521 (+) 2073 WP_347453015.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.30 Da        Isoelectric Point: 4.7172

>NTDB_id=1002627 ABEF85_RS03610 WP_034583327.1 780078..780461(+) (pilG) [Acinetobacter thermotolerans strain ANC 7955]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1002627 ABEF85_RS03610 WP_034583327.1 780078..780461(+) (pilG) [Acinetobacter thermotolerans strain ANC 7955]
ATGGACGATAAATTCCAAAATCTAAAAGTTATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCGGAAACTCTTCT
TCAGCGTGAGGGGTGTGAAGTCGTTACTGCAGTGGATGGCTTTGAAGCACTGTCCAAAATTGCAGAGGCAAATCCCGATA
TCGTTTTTGTAGACATCATGATGCCGCGCCTAGACGGTTACCAGACTTGTGCCTTGATTAAAAACTCGCAAAACTACCAG
AACATTCCTGTTATTATGCTATCAAGTAAAGATGGTTTGTTCGACCAGGCTAAAGGCCGTGTAGTAGGTTCAGATGAGTA
TCTTACTAAGCCATTCAGCAAAGATGAGTTGCTGAACGCAATCCGCAACCACATCAGCGCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment