Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   EL147_RS03305 Genome accession   NZ_LR134341
Coordinates   688205..688891 (-) Length   228 a.a.
NCBI ID   WP_007896467.1    Uniprot ID   G5K8X4
Organism   Streptococcus pseudoporcinus strain NCTC13786     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 683205..693891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL147_RS03290 (NCTC13786_00660) sodA 684148..684756 (-) 609 WP_007894843.1 superoxide dismutase SodA -
  EL147_RS03295 (NCTC13786_00661) holA 684875..685906 (-) 1032 WP_007894707.1 DNA polymerase III subunit delta -
  EL147_RS03300 (NCTC13786_00662) comEC/celB 685981..688194 (-) 2214 WP_007894727.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  EL147_RS03305 (NCTC13786_00663) comEA/celA/cilE 688205..688891 (-) 687 WP_007896467.1 helix-hairpin-helix domain-containing protein Machinery gene
  EL147_RS03310 (NCTC13786_00664) - 688961..689701 (-) 741 WP_007894801.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  EL147_RS03315 (NCTC13786_00665) - 689848..690597 (+) 750 WP_007894698.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  EL147_RS10815 - 690707..690835 (+) 129 Protein_649 hypothetical protein -
  EL147_RS03325 (NCTC13786_00666) - 690825..691106 (+) 282 WP_176602249.1 GIY-YIG nuclease family protein -
  EL147_RS03330 (NCTC13786_00667) - 691338..693344 (-) 2007 WP_007894631.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 24949.00 Da        Isoelectric Point: 9.0403

>NTDB_id=1002072 EL147_RS03305 WP_007896467.1 688205..688891(-) (comEA/celA/cilE) [Streptococcus pseudoporcinus strain NCTC13786]
MIKQLISCKDKVCYLISKIHLLTLLLVIGLFCLLMIFLGGRKEIPETTASTVKLENIQEKQETKASAIESASAQEQTNKE
IVVDVKGAVKQEGVYRLSRESRVTDLIKMAGGLTVSADRRAVNLAQKLSDGSVVYIAKIGENRSVIPKEENSAHSSAIDK
ESIDSKININTAKVEDLTKIPGIGAKRAKEIIDVRESQGGFKKLEDLLKISGIGQKTLEKLKDDISVD

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1002072 EL147_RS03305 WP_007896467.1 688205..688891(-) (comEA/celA/cilE) [Streptococcus pseudoporcinus strain NCTC13786]
ATGATAAAACAGTTAATATCGTGTAAGGACAAAGTGTGCTATCTTATATCGAAAATACATTTACTGACATTACTGCTAGT
TATAGGACTTTTTTGCCTATTAATGATTTTCTTAGGTGGTAGAAAAGAGATACCTGAAACCACTGCTTCAACTGTAAAAC
TTGAGAATATCCAGGAAAAGCAGGAAACAAAAGCTAGTGCTATAGAATCAGCATCAGCTCAAGAACAAACTAATAAAGAA
ATTGTCGTAGATGTCAAAGGAGCAGTTAAGCAAGAAGGTGTTTATCGTCTTAGCAGGGAAAGTCGTGTGACAGATCTTAT
CAAAATGGCGGGTGGGCTTACGGTTTCAGCTGATAGGAGAGCTGTTAACTTAGCTCAAAAATTAAGTGATGGTAGTGTAG
TGTACATTGCAAAAATTGGTGAGAACAGATCAGTTATTCCTAAGGAAGAAAATAGTGCTCACTCTAGTGCGATAGATAAA
GAGAGTATTGATTCAAAAATTAATATCAACACTGCAAAGGTTGAAGACTTAACAAAGATTCCGGGAATTGGAGCTAAAAG
AGCTAAGGAAATTATTGATGTTCGAGAGAGTCAGGGTGGCTTTAAGAAACTGGAAGACCTTCTAAAGATTTCTGGAATTG
GGCAAAAGACATTAGAGAAACTCAAAGATGATATTAGTGTTGATTAG

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(82-136)

Helix-hairpin-helix motif (HHH_3)

(165-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5K8X4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis SK321

42.381

92.105

0.39
  comEA Streptococcus thermophilus LMD-9

40.367

95.614

0.386
  comEA Lactococcus lactis subsp. cremoris KW2

40.758

92.544

0.377

Multiple sequence alignment