Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   EL133_RS02455 Genome accession   NZ_LR134323
Coordinates   477632..478042 (+) Length   136 a.a.
NCBI ID   WP_006739054.1    Uniprot ID   G5KCT4
Organism   Streptococcus urinalis strain NCTC13766     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 472632..483042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS02430 (NCTC13766_00489) rlmD 473461..474813 (+) 1353 WP_006740426.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  EL133_RS02435 (NCTC13766_00490) - 474856..475431 (+) 576 WP_006739956.1 GNAT family N-acetyltransferase -
  EL133_RS02440 (NCTC13766_00491) - 475586..475915 (+) 330 WP_006738984.1 LytTR family transcriptional regulator DNA-binding domain-containing protein -
  EL133_RS02445 (NCTC13766_00493) - 475921..476668 (+) 748 Protein_458 response regulator transcription factor -
  EL133_RS02450 (NCTC13766_00494) - 476680..477441 (+) 762 WP_006740054.1 hypothetical protein -
  EL133_RS02455 (NCTC13766_00495) comD/blpH 477632..478042 (+) 411 WP_006739054.1 GHKL domain-containing protein Regulator
  EL133_RS11700 (NCTC13766_00496) - 478057..478182 (-) 126 WP_006739507.1 hypothetical protein -
  EL133_RS02460 (NCTC13766_00497) comA/nlmT 478287..479138 (-) 852 WP_006740282.1 ATP-binding cassette domain-containing protein Regulator
  EL133_RS02470 (NCTC13766_00498) - 479135..480432 (-) 1298 Protein_463 ABC transporter transmembrane domain-containing protein -
  EL133_RS02475 (NCTC13766_00499) - 481134..481751 (+) 618 WP_006740315.1 YesL family protein -
  EL133_RS02480 (NCTC13766_00500) - 481810..482718 (+) 909 WP_006738887.1 AEC family transporter -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15381.95 Da        Isoelectric Point: 9.3258

>NTDB_id=1001655 EL133_RS02455 WP_006739054.1 477632..478042(+) (comD/blpH) [Streptococcus urinalis strain NCTC13766]
MLPAKVLEAQNLCLKVNVEIPKPIDLRHIDTLDFIRIMTILLDNAIEAAIESRDKEVSLAFLDEKDKVVIVIKNTTKQKR
VSYQNIFNKGISSKGYGRGIGLSSVSEILDRYSYITITTTSYNFSFTQIIEIKKLG

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1001655 EL133_RS02455 WP_006739054.1 477632..478042(+) (comD/blpH) [Streptococcus urinalis strain NCTC13766]
ATGCTTCCTGCAAAAGTCTTAGAAGCTCAAAACCTTTGTTTAAAAGTAAATGTTGAAATTCCCAAACCAATTGATTTAAG
ACATATTGATACTTTAGATTTTATTCGGATTATGACGATTCTATTAGACAATGCTATCGAAGCTGCTATTGAATCTCGTG
ACAAAGAAGTCTCATTAGCATTTCTTGATGAAAAAGATAAAGTGGTTATTGTCATAAAAAATACCACAAAGCAAAAAAGA
GTAAGTTATCAAAATATCTTTAATAAAGGTATTTCATCAAAAGGTTATGGTAGAGGTATCGGTTTATCCAGTGTCAGTGA
AATTTTGGATCGCTATAGTTATATTACGATAACAACAACGTCTTACAACTTTTCATTTACACAAATAATAGAAATAAAAA
AACTAGGATAA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(30-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KCT4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

44.361

97.794

0.434
  comD/comD1 Streptococcus equinus JB1

41.353

97.794

0.404
  comD/comD3 Streptococcus equinus JB1

37.121

97.059

0.36