Detailed information NTG1001564

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABFK62_RS18415
• Genome accession: NZ_CP156044
• Coordinates: 3763902..3764960 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain D13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3758902..3769960

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFK62_RS18390 (ABFK62_18390)	aroK	3759177..3759746 (-)	570	WP_000643712.1	shikimate kinase AroK	-
ABFK62_RS18395 (ABFK62_18395)	pilQ	3759758..3761923 (-)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
ABFK62_RS18400 (ABFK62_18400)	pilP	3761986..3762513 (-)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
ABFK62_RS18405 (ABFK62_18405)	pilO	3762524..3763264 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABFK62_RS18410 (ABFK62_18410)	pilN	3763261..3763902 (-)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
ABFK62_RS18415 (ABFK62_18415)	pilM	3763902..3764960 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
ABFK62_RS18420 (ABFK62_18420)	ponA	3765122..3767677 (+)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
ABFK62_RS18425 (ABFK62_18425)	-	3767695..3768519 (-)	825	WP_001990541.1	putative RNA methyltransferase	-
ABFK62_RS18430 (ABFK62_18430)	-	3768522..3768854 (-)	333	WP_000169598.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=1001564 ABFK62_RS18415 WP_002014066.1 3763902..3764960(-) (pilM) [Acinetobacter baumannii strain D13]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1001564 ABFK62_RS18415 WP_002014066.1 3763902..3764960(-) (pilM) [Acinetobacter baumannii strain D13]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423