Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ABFK62_RS03235 | Genome accession | NZ_CP156044 |
| Coordinates | 661518..661928 (+) | Length | 136 a.a. |
| NCBI ID | WP_001200131.1 | Uniprot ID | A0A0J1A5R4 |
| Organism | Acinetobacter baumannii strain D13 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 656518..666928
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFK62_RS03220 (ABFK62_03220) | - | 657507..659813 (+) | 2307 | WP_000259109.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| ABFK62_RS03225 (ABFK62_03225) | - | 659858..660631 (-) | 774 | WP_000682841.1 | SDR family oxidoreductase | - |
| ABFK62_RS03230 (ABFK62_03230) | mazG | 660743..661549 (+) | 807 | WP_000359493.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| ABFK62_RS03235 (ABFK62_03235) | comEA | 661518..661928 (+) | 411 | WP_001200131.1 | ComEA family DNA-binding protein | Machinery gene |
| ABFK62_RS03240 (ABFK62_03240) | pcnB | 662053..663516 (+) | 1464 | WP_001194201.1 | polynucleotide adenylyltransferase PcnB | - |
| ABFK62_RS03245 (ABFK62_03245) | folK | 663513..663995 (+) | 483 | WP_000219215.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| ABFK62_RS03250 (ABFK62_03250) | panB | 664041..664850 (+) | 810 | WP_000624763.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| ABFK62_RS03255 (ABFK62_03255) | panC | 664854..665702 (+) | 849 | WP_000846362.1 | pantoate--beta-alanine ligase | - |
| ABFK62_RS03260 (ABFK62_03260) | rapZ | 665725..666576 (+) | 852 | WP_000821671.1 | RNase adapter RapZ | - |
| ABFK62_RS03265 (ABFK62_03265) | - | 666573..666842 (+) | 270 | WP_000567533.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 15650.89 Da Isoelectric Point: 10.3828
>NTDB_id=1001535 ABFK62_RS03235 WP_001200131.1 661518..661928(+) (comEA) [Acinetobacter baumannii strain D13]
MQYSIRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
MQYSIRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
Nucleotide
Download Length: 411 bp
>NTDB_id=1001535 ABFK62_RS03235 WP_001200131.1 661518..661928(+) (comEA) [Acinetobacter baumannii strain D13]
ATGCAATACAGCATAAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
ATGCAATACAGCATAAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii strain A118 |
96.324 |
100 |
0.963 |
| comEA | Acinetobacter baumannii D1279779 |
95.588 |
100 |
0.956 |
| comEA | Acinetobacter baylyi ADP1 |
41.985 |
96.324 |
0.404 |