Detailed information NTG1001481

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ABFK61_RS07500
• Genome accession: NZ_CP156041
• Coordinates: 1566247..1566729 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046489.1
• Uniprot ID: A0A0J0ZLV7
• Organism: Acinetobacter baumannii strain D78
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1561247..1571729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFK61_RS07465 (ABFK61_07465)	-	1561358..1562389 (+)	1032	WP_001189459.1	lipase secretion chaperone	-
ABFK61_RS07470 (ABFK61_07470)	-	1562504..1563445 (+)	942	WP_153957607.1	triacylglycerol lipase	-
ABFK61_RS07475 (ABFK61_07475)	rplS	1563497..1563865 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ABFK61_RS07480 (ABFK61_07480)	trmD	1564073..1564813 (-)	741	WP_000464595.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ABFK61_RS07485 (ABFK61_07485)	rimM	1564859..1565407 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ABFK61_RS07490 (ABFK61_07490)	rpsP	1565427..1565678 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ABFK61_RS07495 (ABFK61_07495)	pilE	1565825..1566250 (-)	426	WP_000788336.1	type IV pilin protein	Machinery gene
ABFK61_RS07500 (ABFK61_07500)	pilY2	1566247..1566729 (-)	483	WP_001046489.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
ABFK61_RS07505 (ABFK61_07505)	pilY1	1566740..1570594 (-)	3855	WP_000768943.1	VWA domain-containing protein	Machinery gene
ABFK61_RS07510 (ABFK61_07510)	pilX	1570606..1571424 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17657.94 Da
• Isoelectric Point: 8.4737

>NTDB_id=1001481 ABFK61_RS07500 WP_001046489.1 1566247..1566729(-) (pilY2) [Acinetobacter baumannii strain D78]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1001481 ABFK61_RS07500 WP_001046489.1 1566247..1566729(-) (pilY2) [Acinetobacter baumannii strain D78]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

3D structure

• AlphaFold DB: A0A0J0ZLV7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	96.25	100	0.963
comE	Acinetobacter baylyi ADP1	41.86	100	0.45