Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABFK61_RS07495 | Genome accession | NZ_CP156041 |
| Coordinates | 1565825..1566250 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain D78 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1560825..1571250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFK61_RS07465 (ABFK61_07465) | - | 1561358..1562389 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| ABFK61_RS07470 (ABFK61_07470) | - | 1562504..1563445 (+) | 942 | WP_153957607.1 | triacylglycerol lipase | - |
| ABFK61_RS07475 (ABFK61_07475) | rplS | 1563497..1563865 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABFK61_RS07480 (ABFK61_07480) | trmD | 1564073..1564813 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABFK61_RS07485 (ABFK61_07485) | rimM | 1564859..1565407 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABFK61_RS07490 (ABFK61_07490) | rpsP | 1565427..1565678 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABFK61_RS07495 (ABFK61_07495) | pilE | 1565825..1566250 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ABFK61_RS07500 (ABFK61_07500) | pilY2 | 1566247..1566729 (-) | 483 | WP_001046489.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ABFK61_RS07505 (ABFK61_07505) | pilY1 | 1566740..1570594 (-) | 3855 | WP_000768943.1 | VWA domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=1001480 ABFK61_RS07495 WP_000788336.1 1565825..1566250(-) (pilE) [Acinetobacter baumannii strain D78]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1001480 ABFK61_RS07495 WP_000788336.1 1565825..1566250(-) (pilE) [Acinetobacter baumannii strain D78]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |